KEGG   Jeongeupia sp. USM3: BJP62_04465
Entry
BJP62_04465       CDS       T04552                                 
Name
(GenBank) DNA-binding protein HU
  KO
K03530  DNA-binding protein HU-beta
Organism
jeu  Jeongeupia sp. USM3
Brite
KEGG Orthology (KO) [BR:jeu00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:jeu03032]
    BJP62_04465
   03036 Chromosome and associated proteins [BR:jeu03036]
    BJP62_04465
   03400 DNA repair and recombination proteins [BR:jeu03400]
    BJP62_04465
DNA replication proteins [BR:jeu03032]
 Prokaryotic type
  DNA Replication Initiation Factors
   Initiation factors (bacterial)
    BJP62_04465
Chromosome and associated proteins [BR:jeu03036]
 Prokaryotic type
  Nucleoid associated proteins
   HU (heat unstable protein)
    BJP62_04465
DNA repair and recombination proteins [BR:jeu03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Supressor
      BJP62_04465
SSDB
Motif
Pfam: Bac_DNA_binding HU-HIG HU-CCDC81_bac_2 Lmo2446-like_N HU-CCDC81_bac_1
Other DBs
NCBI-ProteinID: AOX99775
UniProt: A0A1D9BBC6
LinkDB
Position
complement(983866..984138)
AA seq 90 aa
MNKSELIDAIAESAGLSKAAAGKSLDAAVEAISKALQAGDEVTLVGFGTFYVAEREARSG
RNPRTGETIEIAAAKQPKFRAGKSLKDAVQ
NT seq 273 nt   +upstreamnt  +downstreamnt
gtgaacaaatctgaactgatcgacgctatcgctgaatctgccggcctgtccaaggctgct
gctggcaagtcgctcgacgctgctgttgaagccatttccaaggcactgcaggctggcgac
gaagtgacgctggtcggcttcggtaccttctatgttgccgagcgtgaagcacgcagcggc
cgcaatccgcgtaccggtgaaacgatcgaaatcgctgcagcgaagcagcccaaatttagg
gctggcaaatcgctgaaagatgcagtacaatga

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