Jeongeupia sp. USM3: BJP62_04625
Help
Entry
BJP62_04625 CDS
T04552
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
jeu
Jeongeupia sp. USM3
Pathway
jeu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
jeu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BJP62_04625
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
jeu03021
]
BJP62_04625
03019 Messenger RNA biogenesis [BR:
jeu03019
]
BJP62_04625
Transcription machinery [BR:
jeu03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
BJP62_04625
Messenger RNA biogenesis [BR:
jeu03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
BJP62_04625
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
OB_RNB
AAA_25
S1CSD-TOTE-2
AAA
NACHT
AAA_22
Motif
Other DBs
NCBI-ProteinID:
AOX99803
LinkDB
All DBs
Position
complement(1015952..1017208)
Genome browser
AA seq
418 aa
AA seq
DB search
MHLSELKPLHVTELVEMATKFEIDGANRLRKQDLIFALLKNQAKKGETIFGDGTLEVLPD
GFGFLRSPDTSYLAGPDDIYVSPSQIRRFNLHTGDSVEGEIRTPKEGERYVALVKVDKIN
GEPPEVSKNKILFENLTPLFPNKRLNLERAIKAEENITGRVIDLIAPIGKGQRALLVAPP
KTGKTVMLQNIAHAITANHPDVELIVLLIDERPEEVTEMTRSVRGEVISSTFDEPATRHV
QVAEMVIEKAKRLVEHKKDVVILLDSITRLARAYNTVVPASGKVLTGGVDANALQRPKRF
FGAARNIEEGGSLTIIATALIDTGSRMDDVIYEEFKGTGNNEIHLDRRMAEKRQFPAINI
NRSGTRREELLIPQEQLQKIWVLRKLLYPMDDLEAMEFLLDKIKATKTNNDFFDSMRR
NT seq
1257 nt
NT seq
+upstream
nt +downstream
nt
atgcatttgtccgaactgaagcccttgcacgttaccgaactggtcgaaatggccaccaag
ttcgagatcgacggtgccaaccgcttgcgcaagcaagacctgattttcgccctgctgaaa
aatcaggccaagaagggcgagaccatcttcggcgacggcacgctggaagtgctgccggac
ggcttcggcttcctgcgcagcccggataccagctatctggccggcccggatgacatctac
gtcagcccgagccagattcgccgcttcaacctgcataccggcgacagcgtcgaaggcgaa
atccgcacgccgaaggaaggcgagcgctacgtcgcgctggtgaaggtcgacaagatcaac
ggcgagccgccggaagtctccaagaacaagatcctgttcgagaacctgacgccgctgttc
ccgaacaagcgcctcaacctcgagcgggcgatcaaggccgaagaaaacatcaccggccgg
gtgatcgacctgatcgcgccgatcggcaagggccagcgcgcgctgctggtcgcgccgccg
aagaccggcaagacggtgatgctgcagaacatcgcgcatgcgatcaccgccaatcatccg
gacgtcgaactgatcgtgctgctgatcgacgagcgccccgaagaagtgaccgaaatgacg
cgttcggtgcgcggcgaagtgatcagttcgaccttcgacgagccggccacgcgtcacgtc
caggtcgccgaaatggtgatcgaaaaggccaagcgcctggtcgagcacaagaaggatgtc
gtcatcctgctcgactcgatcacccggctggcgcgtgcgtacaacaccgtcgtccccgcg
tcgggcaaggtgctgaccggtggtgtcgatgccaacgcgctgcagcggccgaagcgcttc
ttcggcgcggcacgcaacatcgaggaaggcggcagcctgaccatcattgccaccgcgctg
atcgacaccggttcgcgcatggacgacgtgatctacgaggaattcaagggcaccggcaac
aacgagatccatctcgaccgccggatggccgagaagcgccagttcccggcgatcaacatc
aaccgttcgggtacccgtcgcgaagagctgctgattccgcaggaacagttgcagaagatc
tgggtgctgcgcaagctgctgtacccgatggacgatctcgaggcgatggaattcctgctc
gacaagatcaaggcgacgaagacgaacaacgacttcttcgattcgatgcgccgctaa
DBGET
integrated database retrieval system
