Jeongeupia sp. USM3: BJP62_07785
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Entry
BJP62_07785 CDS
T04552
Name
(GenBank) excinuclease ABC subunit A
KO
K03701
excinuclease ABC subunit A
Organism
jeu
Jeongeupia sp. USM3
Pathway
jeu03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
jeu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
BJP62_07785
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
jeu03400
]
BJP62_07785
DNA repair and recombination proteins [BR:
jeu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
BJP62_07785
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
BJP62_07785
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrA_inter
UvrA_DNA-bind
ABC_tran
SMC_N
AAA_29
AAA_16
AAA_21
nSTAND1
AAA_23
AAA_25
nSTAND3
RsgA_GTPase
DnaJ_CXXCXGXG
AAA_22
APS_kinase
NACHT
BCA_ABC_TP_C
Viral_helicase1
cobW
MMR_HSR1
NTPase_1
MeaB
T2SSE
Motif
Other DBs
NCBI-ProteinID:
AOY00354
UniProt:
A0A1D9BDG2
LinkDB
All DBs
Position
1639939..1642785
Genome browser
AA seq
948 aa
AA seq
DB search
MSYRPADADTPLIRIRGARTHNLKNVNLDIPRGKLVVITGLSGSGKSSLAFDTLYAEGQR
RYVESLSAYARQFLQLMEKPDVDLIEGLSPAISIEQKATSHNPRSTVGTVTEIHDYLRLL
FARVGTPYCPDHGQPLASQTVSQMVDHVLALPEETRLMVLAPVIVGKKGENLDLFDELRA
QGFVRVRVDGEVYEMDAIPKLDKNKKHTIDVVIDRIKVRADLKQRLAESFETALRHADGR
AIAVEMDSGKEHWFSAKFACPVCSYSLPELEPRLFSFNNPMGACPKCDGLGQITYFDPKR
VVAHPELSLAAGAIKGWDKRNQFYFQMLLSLANHYGFDVNTPWSELGEAVQQVVLHGSGR
DEIAFTYMNERGSKFERVHSFEGIIPNLERRYRETDSATVREELAKYQNNQACPSCAGSR
LRREARHVRVGSENLHAISQMALRDTAAFFESLQLEGAKAQIAEKIVKEIRERLGFLVNV
GLDYLSLERSADTLSGGEAQRIRLASQIGSGLTGVMYVLDEPSIGLHQRDNDRLLGTLMR
LRDLDNSVIVVEHDEDAIRAADFLVDIGPGAGVHGGEVIAAGHPDDIMAEPKSITGQFLS
GARKIEIPAKRRAPEPDRWLTLKGAHGNNLKYVNLALPVGLFVAITGVSGSGKSTLINDT
LYTLAAKELNGASAEPAPFHEVHGLDHFDKVISVDQSPIGRTPRSNPATYTGLFTPIREL
FAGVPSSRERGYGPGRFSFNVKGGRCEACQGDGVLKVEMHFLPDVYVPCDVCHGKRYNRE
TLEVQYKGRNITEVLEMTVEQALAFFEAVPTVARKLRTLMDVGLGYIRLGQSATTLSGGE
AQRVKLALELSKRDTGRTLYILDEPTTGLHFHDIDLLLSVLQRLSEHGNTVVVIEHNLDV
IKTADWVVDLGPEGGAGGGQIIACGAPEAVAANPASHTGHYLARVLAA
NT seq
2847 nt
NT seq
+upstream
nt +downstream
nt
atgagctaccgccccgccgacgcagacaccccgctgatccgcatccgcggcgcgcgcacg
cacaacctgaagaacgtcaatctcgacattccgcgcggcaagctcgtcgtcatcaccggg
ctgtcggggtcgggcaaatcgtcgctggcgttcgacacgctctacgccgagggccagcgc
cgctatgtcgaatcgctgtcggcgtacgcgcggcagtttttgcagctgatggaaaagccc
gacgtcgacctgatcgaggggctctccccggcgatctcgatcgagcagaaggccaccagc
cacaacccgcgctcgaccgtcggcaccgtcaccgaaatccacgattacctgcggctgctg
ttcgcgcgcgtcggcacgccgtactgcccggaccacggccagcccctcgcctcgcagacc
gtcagccagatggtcgaccacgtgctggcgctacccgaagagaccaggctgatggtgctg
gcgccggtgatcgtcggcaagaagggcgaaaacctcgacctgttcgacgaattgcgcgcg
cagggtttcgtgcgcgtgcgcgtcgacggcgaggtgtacgagatggacgccatcccgaag
ctcgacaagaacaagaaacacacgatcgacgtcgtcatcgaccggatcaaggtgcgtgcc
gacctgaagcagcggctcgccgaatcgttcgagaccgcgctgcgccacgccgacggccgg
gcgatcgcggtggaaatggactctggcaaagagcactggttctcggccaagttcgcctgc
ccggtgtgcagctacagcctgcccgagctcgaaccgcggctgttctcgttcaacaacccg
atgggcgcctgcccgaagtgcgacggcctcggccagatcacctatttcgacccgaagcgc
gtcgtcgcccaccccgaactgagccttgccgccggcgcgatcaagggctgggacaagcgc
aaccagttctacttccagatgctgctgagtctggcgaaccactacggcttcgacgtcaac
acgccgtggagcgaactcggcgaggcggtacagcaggtcgtgctgcacggttcgggccgc
gacgagatcgccttcacctacatgaacgagcgcggcagcaagttcgagcgcgtgcacagc
ttcgaaggcatcatcccgaacctcgagcgccgctaccgcgaaaccgactcggcgacggtg
cgcgaggagctggccaagtaccagaacaaccaggcctgcccgagctgcgccggctcgcgg
ctgcggcgcgaagcccgccacgtccgggtcggcagcgagaacctgcacgcgatcagccag
atggcgctgcgcgacacggcggcgtttttcgaatcgctgcagctcgaaggcgccaaggcg
cagatcgccgaaaagatcgtcaaggaaatccgcgagcggctgggcttcctcgtcaacgtc
ggcctcgactacctgagcctcgagcgcagcgccgacacgctgtcgggcggtgaagcgcag
cgcatccgccttgccagccagatcggctcgggcctgaccggggtgatgtacgtgctcgac
gagccgtcgatcggcctgcaccagcgcgacaacgaccggctgctcggcaccttgatgcgg
ctgcgcgacctcgacaactcggtcatcgtcgtcgaacacgacgaggacgcgatccgcgcc
gccgacttcctcgtcgacatcggccccggcgccggcgtccacggcggcgaggtgatcgcc
gccggccacccggacgacatcatggccgaaccgaagtcgatcaccggccagttcctctcc
ggcgcacgcaagatcgagattccggccaagcgtcgcgcccccgagccggaccgctggctg
acgctcaagggcgcgcacggcaacaacctcaagtacgtgaacctggcgctgccggtcggc
ctcttcgtcgcgatcaccggcgtctcgggctcgggcaagagcacgctgatcaacgacacg
ctgtacacgctggcggcgaaggaactcaacggtgcctcggccgagccggcgccattccac
gaagtgcacggcctcgaccatttcgacaaggtcatcagcgtcgaccagagcccgatcggc
cgcacgccgcgctcgaacccggcgacgtacaccgggctgttcacgccgatccgcgaactg
ttcgccggcgtgccgtcgagccgtgaacgcggctacggcccgggccgcttctcgttcaac
gtcaagggcggccgctgcgaggcctgccagggcgacggcgtgctcaaggtcgagatgcac
ttcctgcccgacgtctacgtgccgtgcgacgtctgtcacggcaagcgttacaaccgcgaa
acgctcgaggtccagtacaagggcaggaacatcaccgaagtgctggagatgacggtcgag
caggcgctggcgttcttcgaagcggtgccgacggtcgcgcgcaagctcaggacgctgatg
gacgtcggcctcggctacatccgccttggccagagcgcgacgacgctgtcgggcggcgag
gcgcaacgggtcaagctggcgctggagctgtccaagcgcgacaccggccgcacgctctac
atcctcgacgagccgaccaccggcctgcacttccacgacatcgacctgctcttgagcgtg
ctgcagcggctgtccgaacacggcaataccgtggtggtgatcgagcacaacctcgacgtg
atcaagaccgccgactgggtcgtcgacctcgggcccgagggcggcgccggcggtggccag
atcatcgcctgcggcgcaccggaagccgtcgccgcgaatccggccagccacaccggccac
tacctggcgcgggtgctggccgcctga
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