KEGG   Jeongeupia sp. USM3: BJP62_07785
Entry
BJP62_07785       CDS       T04552                                 
Name
(GenBank) excinuclease ABC subunit A
  KO
K03701  excinuclease ABC subunit A
Organism
jeu  Jeongeupia sp. USM3
Pathway
jeu03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:jeu00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    BJP62_07785
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:jeu03400]
    BJP62_07785
DNA repair and recombination proteins [BR:jeu03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     BJP62_07785
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      BJP62_07785
SSDB
Motif
Pfam: UvrA_inter UvrA_DNA-bind ABC_tran SMC_N AAA_29 AAA_16 AAA_21 nSTAND1 AAA_23 AAA_25 nSTAND3 RsgA_GTPase DnaJ_CXXCXGXG AAA_22 APS_kinase NACHT BCA_ABC_TP_C Viral_helicase1 cobW MMR_HSR1 NTPase_1 MeaB T2SSE
Other DBs
NCBI-ProteinID: AOY00354
UniProt: A0A1D9BDG2
LinkDB
Position
1639939..1642785
AA seq 948 aa
MSYRPADADTPLIRIRGARTHNLKNVNLDIPRGKLVVITGLSGSGKSSLAFDTLYAEGQR
RYVESLSAYARQFLQLMEKPDVDLIEGLSPAISIEQKATSHNPRSTVGTVTEIHDYLRLL
FARVGTPYCPDHGQPLASQTVSQMVDHVLALPEETRLMVLAPVIVGKKGENLDLFDELRA
QGFVRVRVDGEVYEMDAIPKLDKNKKHTIDVVIDRIKVRADLKQRLAESFETALRHADGR
AIAVEMDSGKEHWFSAKFACPVCSYSLPELEPRLFSFNNPMGACPKCDGLGQITYFDPKR
VVAHPELSLAAGAIKGWDKRNQFYFQMLLSLANHYGFDVNTPWSELGEAVQQVVLHGSGR
DEIAFTYMNERGSKFERVHSFEGIIPNLERRYRETDSATVREELAKYQNNQACPSCAGSR
LRREARHVRVGSENLHAISQMALRDTAAFFESLQLEGAKAQIAEKIVKEIRERLGFLVNV
GLDYLSLERSADTLSGGEAQRIRLASQIGSGLTGVMYVLDEPSIGLHQRDNDRLLGTLMR
LRDLDNSVIVVEHDEDAIRAADFLVDIGPGAGVHGGEVIAAGHPDDIMAEPKSITGQFLS
GARKIEIPAKRRAPEPDRWLTLKGAHGNNLKYVNLALPVGLFVAITGVSGSGKSTLINDT
LYTLAAKELNGASAEPAPFHEVHGLDHFDKVISVDQSPIGRTPRSNPATYTGLFTPIREL
FAGVPSSRERGYGPGRFSFNVKGGRCEACQGDGVLKVEMHFLPDVYVPCDVCHGKRYNRE
TLEVQYKGRNITEVLEMTVEQALAFFEAVPTVARKLRTLMDVGLGYIRLGQSATTLSGGE
AQRVKLALELSKRDTGRTLYILDEPTTGLHFHDIDLLLSVLQRLSEHGNTVVVIEHNLDV
IKTADWVVDLGPEGGAGGGQIIACGAPEAVAANPASHTGHYLARVLAA
NT seq 2847 nt   +upstreamnt  +downstreamnt
atgagctaccgccccgccgacgcagacaccccgctgatccgcatccgcggcgcgcgcacg
cacaacctgaagaacgtcaatctcgacattccgcgcggcaagctcgtcgtcatcaccggg
ctgtcggggtcgggcaaatcgtcgctggcgttcgacacgctctacgccgagggccagcgc
cgctatgtcgaatcgctgtcggcgtacgcgcggcagtttttgcagctgatggaaaagccc
gacgtcgacctgatcgaggggctctccccggcgatctcgatcgagcagaaggccaccagc
cacaacccgcgctcgaccgtcggcaccgtcaccgaaatccacgattacctgcggctgctg
ttcgcgcgcgtcggcacgccgtactgcccggaccacggccagcccctcgcctcgcagacc
gtcagccagatggtcgaccacgtgctggcgctacccgaagagaccaggctgatggtgctg
gcgccggtgatcgtcggcaagaagggcgaaaacctcgacctgttcgacgaattgcgcgcg
cagggtttcgtgcgcgtgcgcgtcgacggcgaggtgtacgagatggacgccatcccgaag
ctcgacaagaacaagaaacacacgatcgacgtcgtcatcgaccggatcaaggtgcgtgcc
gacctgaagcagcggctcgccgaatcgttcgagaccgcgctgcgccacgccgacggccgg
gcgatcgcggtggaaatggactctggcaaagagcactggttctcggccaagttcgcctgc
ccggtgtgcagctacagcctgcccgagctcgaaccgcggctgttctcgttcaacaacccg
atgggcgcctgcccgaagtgcgacggcctcggccagatcacctatttcgacccgaagcgc
gtcgtcgcccaccccgaactgagccttgccgccggcgcgatcaagggctgggacaagcgc
aaccagttctacttccagatgctgctgagtctggcgaaccactacggcttcgacgtcaac
acgccgtggagcgaactcggcgaggcggtacagcaggtcgtgctgcacggttcgggccgc
gacgagatcgccttcacctacatgaacgagcgcggcagcaagttcgagcgcgtgcacagc
ttcgaaggcatcatcccgaacctcgagcgccgctaccgcgaaaccgactcggcgacggtg
cgcgaggagctggccaagtaccagaacaaccaggcctgcccgagctgcgccggctcgcgg
ctgcggcgcgaagcccgccacgtccgggtcggcagcgagaacctgcacgcgatcagccag
atggcgctgcgcgacacggcggcgtttttcgaatcgctgcagctcgaaggcgccaaggcg
cagatcgccgaaaagatcgtcaaggaaatccgcgagcggctgggcttcctcgtcaacgtc
ggcctcgactacctgagcctcgagcgcagcgccgacacgctgtcgggcggtgaagcgcag
cgcatccgccttgccagccagatcggctcgggcctgaccggggtgatgtacgtgctcgac
gagccgtcgatcggcctgcaccagcgcgacaacgaccggctgctcggcaccttgatgcgg
ctgcgcgacctcgacaactcggtcatcgtcgtcgaacacgacgaggacgcgatccgcgcc
gccgacttcctcgtcgacatcggccccggcgccggcgtccacggcggcgaggtgatcgcc
gccggccacccggacgacatcatggccgaaccgaagtcgatcaccggccagttcctctcc
ggcgcacgcaagatcgagattccggccaagcgtcgcgcccccgagccggaccgctggctg
acgctcaagggcgcgcacggcaacaacctcaagtacgtgaacctggcgctgccggtcggc
ctcttcgtcgcgatcaccggcgtctcgggctcgggcaagagcacgctgatcaacgacacg
ctgtacacgctggcggcgaaggaactcaacggtgcctcggccgagccggcgccattccac
gaagtgcacggcctcgaccatttcgacaaggtcatcagcgtcgaccagagcccgatcggc
cgcacgccgcgctcgaacccggcgacgtacaccgggctgttcacgccgatccgcgaactg
ttcgccggcgtgccgtcgagccgtgaacgcggctacggcccgggccgcttctcgttcaac
gtcaagggcggccgctgcgaggcctgccagggcgacggcgtgctcaaggtcgagatgcac
ttcctgcccgacgtctacgtgccgtgcgacgtctgtcacggcaagcgttacaaccgcgaa
acgctcgaggtccagtacaagggcaggaacatcaccgaagtgctggagatgacggtcgag
caggcgctggcgttcttcgaagcggtgccgacggtcgcgcgcaagctcaggacgctgatg
gacgtcggcctcggctacatccgccttggccagagcgcgacgacgctgtcgggcggcgag
gcgcaacgggtcaagctggcgctggagctgtccaagcgcgacaccggccgcacgctctac
atcctcgacgagccgaccaccggcctgcacttccacgacatcgacctgctcttgagcgtg
ctgcagcggctgtccgaacacggcaataccgtggtggtgatcgagcacaacctcgacgtg
atcaagaccgccgactgggtcgtcgacctcgggcccgagggcggcgccggcggtggccag
atcatcgcctgcggcgcaccggaagccgtcgccgcgaatccggccagccacaccggccac
tacctggcgcgggtgctggccgcctga

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