Jeongeupia sp. USM3: BJP62_08860
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Entry
BJP62_08860 CDS
T04552
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
jeu
Jeongeupia sp. USM3
Brite
KEGG Orthology (KO) [BR:
jeu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
jeu03032
]
BJP62_08860
03400 DNA repair and recombination proteins [BR:
jeu03400
]
BJP62_08860
Enzymes [BR:
jeu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
BJP62_08860
DNA replication proteins [BR:
jeu03032
]
Prokaryotic type
DNA Topoisomerases
BJP62_08860
DNA repair and recombination proteins [BR:
jeu03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
BJP62_08860
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_Top1
Toprim
Motif
Other DBs
NCBI-ProteinID:
AOY00541
UniProt:
A0A1D9BDJ4
LinkDB
All DBs
Position
complement(1863754..1866042)
Genome browser
AA seq
762 aa
AA seq
DB search
MPANLLIVESPSKAKTLQKYLGKDFQILASYGHVRGLVRKDGSVDTEHDFKMKYQVIDKN
KKHVDAICAAVKEADNVYLASDPDREGEAISWHIMEILKGKKLLDPAKTFKRVVFHEITE
SAVKAAIEQPRDIDSNLVNAQQARSALDYLVGFNLSPLLWRKVRSGLSAGRVQSPALRLI
CEREIEIRAFTAQEYWTIHLDSHKGRQKFGARLSQWQGKKLEQFDIPDEATQADILKALS
GAEARVAKVEKKKKSRSPAAPFTTSTLQQEGVRKLGMTTDRVMRTAQQLYEGINLGGETV
GLITYMRTDAVALSNEALADIRGYIGDNFDKDYLPKDAVVYKNKSKNAQEAHEAVRPTSI
ARTPDSVKAFLSADQFKLYQMIWKRTLACQMTPAKFDTVGVDIEVGTQAVFRASGQTLVF
PGFIAVYQEDQDDVEDDEDEARLPVLEEGEALPVDKLAGEQHFTQPPPRYSEASLVKALE
EFGIGRPSTYASIIKTLKDREYVDLDRKRFIPTDTGEVVNKFLTDHFTQYVDYNFTAKLE
DQLDEISNGSREWVPVLDDFWKRFHDTVVEKQGLSRKEVTQEELDEDCPKCGNKLAIRLG
KRGRFIGCTTYPECDYTRNLGDDADAAPVEPEVVPDRTCPKCDSPLHIKMGRYGKFIGCS
AYPKCKHIEPLEPPKDTGVECPQCHKGTLKEKKSRYGKLFYSCSTYPDCNYATWDPPIAE
ACPQCQWPVLTIKTTKRRGVEKKCPQKECGWSEVIEPPAPKE
NT seq
2289 nt
NT seq
+upstream
nt +downstream
nt
atgcccgccaatctgttgatcgtcgagtcgccttcgaaggcgaagacgctgcaaaagtat
ctcggcaaggatttccagatcctcgcttcctacggtcacgtccgcggcctggtgcgcaag
gacggctcggtcgacaccgaacacgacttcaagatgaagtatcaggtgatcgacaagaac
aagaagcacgtcgacgcgatctgtgcggcggtgaaggaggcggacaacgtctaccttgca
tccgacccggaccgcgaaggcgaggcgatctcctggcacatcatggagatcctcaagggc
aagaagctcctggacccggccaagacgttcaagcgcgtcgtgttccacgaaatcaccgag
tcggcggtcaaggccgcgatcgagcagccgcgcgacatcgacagcaacctcgtcaacgcg
cagcaggcacgcagcgcgctcgactacctggtcggcttcaacctgtcgccgctgttgtgg
cgcaaggtccgctcgggcctgtcggccggccgcgtccagagtccggcgctgcggctgatc
tgcgagcgcgagatcgagatccgcgcgttcaccgcgcaggaatactggacgatccacctt
gacagccacaagggccggcagaagttcggcgcgcggttgtcgcagtggcagggcaagaag
ctcgaacagttcgacattcccgacgaagcgacgcaggccgacatcctcaaggcgctgagc
ggtgccgaggcgcgtgtcgccaaggtcgagaagaagaagaagtcgcgcagcccggctgcg
ccgttcacgacctcgacgctgcagcaggaaggcgtgcgcaagctcggcatgacgaccgac
cgcgtcatgcggaccgcgcagcagctctatgaagggatcaatctcggcggcgagaccgtc
ggtctgatcacctatatgcgtaccgacgcagtggcgctgtcgaacgaggcactggcggac
atccgcggctatatcggcgacaacttcgacaaggactacctgccgaaggacgccgtcgtc
tacaagaataagtccaagaacgcgcaggaagcgcacgaggcggtgcggccgacgtcgatc
gcgcgcacgcccgactcggtcaaggccttcctcagcgccgaccagttcaagctctaccag
atgatctggaagcgcacgctagcgtgccagatgaccccggccaagttcgacacagtcggt
gtcgacatcgaagtcggcacgcaggcggtgttccgcgcatcgggccagacgttggtgttc
ccgggcttcatcgccgtgtatcaggaagaccaggacgacgtcgaggacgacgaggacgaa
gcccgcctgccggtgctcgaagagggcgaggcactgccggtcgacaagctcgccggcgag
cagcacttcacccagccgccgccgcgctactccgaagcgtcgctggtgaaagcactcgag
gaattcggcatcggccggccgtcgacgtacgcgtcgatcatcaagacgctgaaggaccgc
gaatacgtcgacctcgacaggaagcgcttcatcccgaccgacaccggcgaggtggtcaac
aagttcctgaccgaccacttcacccagtacgtcgactacaacttcaccgccaagctcgaa
gaccagctcgacgagatctccaacggttcgcgcgaatgggtgccggtgctcgacgatttc
tggaagcgtttccacgatacggtggtcgagaagcaggggctgagccgcaaggaagtcacg
caggaagaactcgacgaggactgcccgaagtgcggcaacaagctggcgatccgcctcggc
aagcgcggccgtttcatcggctgcaccacgtatccggagtgcgactacacccgcaatctg
ggtgacgacgccgatgcggcgccggtcgagcccgaggtcgttcccgaccggacctgcccg
aaatgcgacagcccgctgcacatcaagatgggccgctacggcaagttcatcggctgctcg
gcgtaccccaagtgcaagcacatcgaaccgctcgagccgccgaaggacaccggcgtcgag
tgcccgcagtgccacaagggcacgctgaaggaaaagaagagccgttacggcaagctgttc
tactcgtgcagcacctatccggactgcaactacgcgacgtgggatccgccgatcgccgaa
gcctgcccgcaatgccagtggccggtgctgacgatcaagacgaccaagcggcgcggcgtc
gagaagaagtgcccgcagaaggagtgcggctggtccgaagtgatcgagccgccggcaccg
aaggaatga
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integrated database retrieval system
