Jeongeupia sp. USM3: BJP62_08985
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Entry
BJP62_08985 CDS
T04552
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
jeu
Jeongeupia sp. USM3
Pathway
jeu03420
Nucleotide excision repair
jeu03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
jeu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
BJP62_08985
03430 Mismatch repair
BJP62_08985
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
jeu03400
]
BJP62_08985
Enzymes [BR:
jeu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
BJP62_08985
DNA repair and recombination proteins [BR:
jeu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
BJP62_08985
MMR (mismatch excision repair)
Other MMR factors
BJP62_08985
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_12
AAA_30
PcrA_UvrD_tudor
Viral_helicase1
DUF3553
Motif
Other DBs
NCBI-ProteinID:
AOY00561
LinkDB
All DBs
Position
complement(1896151..1898268)
Genome browser
AA seq
705 aa
AA seq
DB search
MAHPLTESLNPEQAAAVELPMAHALILAGAGSGKTRVLTTRIAWLLSTGQLSPAGVLAVT
FTNKAAKEMLARLTAMLPLNPRGLWIGTFHGLCNRMLRLHHRDAGLPATFAILDSTDQLA
AIKRVLKALNVDDERYPPKTVQNYINGQKENGLRAAAAEAWDDYARTLRAIYAEYEAQCR
REGVVDFAELLLACYELLDRNASLREHYRSRFRQILVDEFQDTNRLQYAWLKLLAGPDNA
IFAVGDDDQSIYAFRGANVGNMFDFQKDYAVRHVIRLEQNYRSHGNILDAANAVIANNRE
RLGKTLWTSEAGGEPIRVFEAASDFEEADFLVDEIGQLTRDGVDADEIAVLYRSNAQSRA
IEHALVQAGIPYRVYGGLRFYERQEIKHALAYLRLIANPDDDNALLRIINFPTRGIGNRT
IETLQETARVTGTSLWLAACSGGAGRSAAAVGRFVQLVDAMRRDGDALALPEQVSLVVEQ
SGLGEHYRNDKDGEERLANLGELVSAAAAFVTEDENDLAAFLANASLEGGEREAGAGEAA
VQLMTVHSSKGLEFHSVFLTGIEEGLFPHDNSANDPKGLEEERRLMYVAITRARRRLYLT
LAQSRMLHGQTRYAVASRFLNEIPQDLLRFLNRGYAPQAAVAAPVRKSTPDHGLAIGMNV
RHPKFGIGVVTDHEGGATGNVQVSFREHGVKWLAVAYAKLEALTE
NT seq
2118 nt
NT seq
+upstream
nt +downstream
nt
atggcgcatcctctgaccgaatccctcaatcccgaacaggccgccgcggtcgagctgccg
atggcgcacgcgctgatcctcgccggcgccggcagcggcaagacccgggtattgacgacg
cgcatcgcctggctgctgtcgaccggccagctcagtccggccggcgtgctggcggtgacg
ttcaccaacaaggccgccaaggaaatgctcgcgcggctgacggccatgctgccgctgaac
ccgcgcggcctgtggatcggcaccttccacggcctgtgcaaccggatgctgcggctgcat
caccgcgacgccggcctgccggcgacgttcgcgatcctcgactcgaccgaccagctcgcc
gcgatcaagcgcgtgctcaaggcgctcaacgtcgacgacgagcgctatccgcccaagacg
gtgcagaactacatcaacggccagaaggaaaacggcctgcgcgcagcggcggcggaggcg
tgggacgactacgcgcgcaccttgcgcgcgatctatgccgagtacgaagcgcaatgccgg
cgcgagggcgtggtcgacttcgccgaattgctgctggcatgctacgagctgctcgatcgc
aatgcctcgttgcgcgagcattaccgctcgcgtttccggcagatactggtcgacgaattc
caggataccaaccggctgcaatacgcgtggctcaagctcctggccgggcccgataacgcc
attttcgccgtcggcgacgacgaccagtcgatctacgcgttccgcggtgccaatgtcggc
aatatgttcgactttcagaaggattacgcggtcaggcacgtgatccggctcgagcagaat
taccgctcgcacggcaatatcctcgatgcggccaatgccgtgatcgccaacaatcgcgag
cgcctgggcaagaccttatggacctcggaagccggcggtgagccgatccgggtattcgag
gccgcgtccgatttcgaggaagccgatttcctcgtcgacgaaatcggccagttgacgcgc
gatggcgtcgatgccgacgaaatcgccgtgctgtatcgctcgaatgcgcaatcgcgcgcg
atcgagcacgcgctggttcaggccgggattccgtatcgcgtctatggcgggctgcgtttt
tacgagcgccaggaaatcaagcatgcattggcctatctcaggctgatcgccaatcccgac
gacgacaatgcactgctgcgcatcatcaatttcccgacccgcggcatcggcaaccggacg
atcgaaacgctgcaggaaaccgcgcgcgtcaccgggaccagcctgtggctggcggcgtgc
tcgggcggcgccggccgcagcgcggcggcggtcggccgcttcgtccagctcgtcgacgcg
atgcggcgcgacggcgatgcgctggcgctgcccgagcaggtgtcgctggtggtcgagcag
tccggcctcggcgagcactaccgcaacgacaaggacggcgaggagcggctcgccaacctc
ggcgaactcgtcagtgccgcggcggccttcgtcaccgaggacgagaacgacctggcggcc
ttcctcgccaatgccagcctcgaaggcggagagcgcgaggccggcgccggcgaggcagcg
gtccagctgatgacggtgcactcgtccaaggggcttgagttccactcggtgttcctgacc
gggatcgaggaagggctgtttccgcacgacaactcggccaatgatcccaaggggctcgag
gaagagcggcggctgatgtacgtcgcgatcacccgggcgcgtcgccggctctatctgacg
ctggcacagagccgcatgctgcatggccagacgcgctacgcggtcgccagccgctttctc
aacgagatcccgcaggacctgctgcgcttcctcaaccgcggctatgcgccgcaggcggcg
gtggccgcgccggtgcgcaagagcacgccggatcacgggctggcgatcggcatgaacgtc
aggcatccgaagttcggcatcggtgtcgtgaccgaccacgaaggcggtgcgaccggcaat
gtccaggtcagtttccgcgagcacggcgtcaagtggctggccgtcgcgtatgccaaactg
gaagccctgaccgagtga
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