Jeongeupia sp. USM3: BJP62_09040
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Entry
BJP62_09040 CDS
T04552
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
KO
K02667
two-component system, NtrC family, response regulator PilR
Organism
jeu
Jeongeupia sp. USM3
Pathway
jeu02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
jeu00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
BJP62_09040
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
jeu02022
]
BJP62_09040
02035 Bacterial motility proteins [BR:
jeu02035
]
BJP62_09040
Two-component system [BR:
jeu02022
]
NtrC family
PilS-PilR (type 4 fimbriae synthesis)
BJP62_09040
Bacterial motility proteins [BR:
jeu02035
]
Pilus system
Twitching motility proteins
BJP62_09040
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Response_reg
Sigma54_activ_2
AAA_lid_14
HTH_8
AAA_5
HTH_50
HTH_30
AAA_16
AAA_22
EccE
PG_1098_Fer
HTH_28
Motif
Other DBs
NCBI-ProteinID:
AOY00572
LinkDB
All DBs
Position
complement(1910164..1911519)
Genome browser
AA seq
451 aa
AA seq
DB search
MMARKPRNQRRVLVVDDEVDLADLLELTLVKLGLDVDKANNVAEARALLDTRNYDLLLTD
MRMPDGEGIELIRHVQSARLDVPAAVITAYGSTDNAVAALKAGAFDYLAKPVSLEQLRTL
VKSALQLDDEAAPVPAGESPLLGDSPAIRQVHELVAKLARSQAPVYVTGESGSGKERAAR
LIHARSSRADKPFVAVNCGAIPENLVESEFFGYRKGAFTGADSDRDGFFQAASGGTLFLD
EVADLPLAMQVKLLRVIQERKVRKVGSTTEEPVDVRLISATHQNLADCVDAGRFRLDLYY
RLNVIELKMPPLREMGDDIVLLARHIVARLADCNGIDVPVFAPEALAALARYHFPGNVRE
LENMLERALALSDGETVTPCDLQLDREDLEPGHADGGGLQDYLDRVEKQAILEAIDKTGG
NRTQAAKTLGVTFRSLRYRMDRLGIAGRGDT
NT seq
1356 nt
NT seq
+upstream
nt +downstream
nt
atgatggccaggaaaccgcgtaaccaacgcagggtgctcgtcgtcgacgacgaagtcgac
ctcgccgacctgctcgaactgaccctcgtcaagctggggctcgacgtcgacaaggccaac
aacgtcgccgaggcgcgggcgctgctcgacacgcgcaactacgatctgctgctgaccgac
atgcgcatgcccgacggcgaagggatcgagctgatccgccacgtccagtcggcacggctc
gacgtgccggcggcggtgatcaccgcctacggcagcaccgacaacgccgtcgccgcgctc
aaggccggtgcgttcgactatctggccaagccggtgtcgctcgagcagctgcgcacgctg
gtcaagtcggcgctgcagctcgacgacgaggccgcaccggtccctgccggcgaatcgccg
ctgcttggcgactcgccggcgatccgccaggtccacgagctcgtcgccaagctcgccaga
agccaggcgccggtctacgtgaccggcgagtcgggcagcggcaaggagcgcgcggcgcgg
ctgatccatgcccgctcaagccgcgccgacaagcctttcgtcgcggtcaactgcggcgcg
attccggaaaacctcgtcgaaagcgagttctttggctaccgcaagggcgcgttcaccggc
gccgacagcgaccgcgacggcttcttccaggccgccagcggcggcacgctgttcctcgac
gaggtcgccgacctgccgctggcgatgcaggtcaagctgctgcgggtgatccaggagcgc
aaggtccgcaaggtcggcagcacgaccgaggagccggtcgacgtgcggctgatctcggcg
acccaccagaatctcgccgattgtgtcgatgccggccgcttccggctcgacctgtattac
cggctcaacgtgatcgagctgaagatgccgccgctgcgcgagatgggcgacgacatcgtc
ctgctggcccggcacatcgtcgcccggcttgccgactgcaacggcatcgacgtgccggtg
ttcgcgccggaggcgctggccgcgctggcgcgctaccattttccgggcaatgtgcgcgag
ctcgagaacatgctcgagcgcgcgctggcgctgtccgacggcgaaaccgtaacgccgtgc
gacctgcagctcgaccgcgaggatctcgagcccggacatgccgacggcggcggcctgcag
gactacctcgaccgggtcgagaagcaggcgatcctcgaggcgatcgacaagaccggcggc
aaccggacccaggccgccaagacgctcggcgtgaccttccgcagcctgcgctaccggatg
gaccggctcggcattgccggccggggcgacacatga
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