Jeongeupia sp. USM3: BJP62_14075
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Entry
BJP62_14075 CDS
T04552
Name
(GenBank) ribonuclease II
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
jeu
Jeongeupia sp. USM3
Brite
KEGG Orthology (KO) [BR:
jeu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
jeu03016
]
BJP62_14075
Enzymes [BR:
jeu01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
BJP62_14075
Transfer RNA biogenesis [BR:
jeu03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
BJP62_14075
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNB
Motif
Other DBs
NCBI-ProteinID:
AOY01482
UniProt:
A0A1D9BGX8
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Position
2980505..2982358
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AA seq
617 aa
AA seq
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MHVFYDEDGGFKVATVKEAQAASFMIEDVRGKRGKIKAANVLLKFERPDPAALLAEAEAL
AAEIDVDFLWEVCGADEFGFEDIAAEYFGAGPSPQQQAAALIRIAQAPMYFYKKGRGRYK
AAPEENVKAALAGIERKKREAEQMAAWQAELEAGTLPEAFGAGLKRLIHRPDKNGLEYKA
LAAAADAQQTSVLRLLERVGAIADIEQYFLDGFELEYFPKGRDGVTDAGVAAPDELPVAA
VEAFSIDDVTTTEIDDAFSIRALANGNWQVGIHIAAPVLGIAPGSPLDAQVFERLSTVYF
PGDKITMLPDSAVDVFTLETGSARPAVSMYVELTPGFDVVGHRSVVERVPIVANLRHDQI
EAHFNEDTAGQDGGDYPYKRELNFLWQLANALEARRGKAEDPNAPVRLDYSFYVDRLADG
AKKVRILPRKRGAPMDKLVAELMIFVNSTWGMDLHKAEIAAIYRVQGQGRVRMTTQFGPH
VGLGVDCYAWSSSPLRRAVDFVNQSQIVAMIRGETPRFARNDAELFGAIGAFDTAYAAYG
EFQDKMERYWCLRYLEQENLTELSATLIKENLVRIDGLPLVMRVPGLPELPAGSTVKLQR
LAIDFLELTVECRLATM
NT seq
1854 nt
NT seq
+upstream
nt +downstream
nt
atgcacgttttttatgatgaggatggcggcttcaaggtcgccacggtgaaggaggcgcag
gccgccagcttcatgatcgaggacgtgcgcggcaagcgcggcaagatcaaggcggccaac
gtgctgctgaagttcgagcggcccgacccggccgcgctgctggccgaggccgaagcgctc
gccgccgagatcgacgtcgatttcctgtgggaagtctgcggtgccgacgaattcggtttc
gaggacatcgccgccgaatacttcggcgccggcccgtcgccgcagcagcaggcggcggcg
ctgatccgcatcgcccaggcgccgatgtacttctacaagaagggccgcggccgctacaag
gccgcgccggaagagaacgtcaaggccgcgctggccggcatcgagcgcaagaagcgcgag
gccgagcagatggccgcgtggcaggccgagctcgaagccggcacgctgcccgaggcgttc
ggcgcggggctgaagcggctgatccaccggccggacaagaacggcctcgagtacaaggcg
ctggccgccgcggccgacgcgcagcagaccagcgtattgcggctgctcgaacgcgtcggc
gcgatcgccgacatcgagcagtacttcctcgacggcttcgagctcgaatacttccccaag
ggccgcgacggcgtcaccgacgcaggtgtcgccgcacccgacgagctgccggttgccgcg
gtcgaggcgttctcgatcgacgacgtgacgacgaccgaaatcgacgacgcattcagcatc
agggcgctggccaacggcaactggcaggttggcatccacatcgccgcgccggtgctcggc
atcgcgcccggcagcccgctcgacgcgcaggtgttcgagcggctgtcgacggtgtacttt
cccggcgacaagatcaccatgctgccggactcggcggtcgacgtgttcacgctcgaaacc
ggcagtgcgcgcccggcggtgagcatgtacgtcgagctgaccccgggcttcgacgtcgtc
ggtcaccgatcggtcgtcgagcgcgtgccgatcgtcgccaacctgcggcacgaccagatc
gaagcgcacttcaacgaggacaccgccggccaggacggcggcgactacccgtacaagcgc
gaactcaacttcctctggcaactcgcgaatgcgctcgaggcgcgccgcggcaaggcggaa
gacccgaacgcaccggtcaggctcgactacagcttctatgtcgaccgacttgccgacggc
gcgaagaaggtccgcatcctgccgcgcaaacgcggcgcaccgatggacaagctcgttgcc
gaactgatgatcttcgtcaacagcacctgggggatggacctgcacaaggccgagatcgcc
gcgatctaccgcgtgcaggggcagggccgggtacggatgacgacacagttcggcccgcac
gtcggcctcggcgtcgactgctacgcgtggtcgagttcgccgctcaggcgcgcggtcgac
ttcgtcaaccagtcgcagatcgttgcgatgatccggggcgaaacgccgcgcttcgccagg
aacgacgccgagctgttcggcgcgatcggcgcgttcgacaccgcctacgccgcatacggc
gagtttcaggacaagatggaacgctactggtgcctgcgctaccttgaacaggagaacctg
accgaactctccgcgacgctgatcaaggaaaaccttgttcgcatcgacggcctgccgctg
gtgatgcgcgtgccggggctgccggaattgccggccggatcgacggtcaaactgcagagg
ctggcgatcgatttccttgaactgaccgtcgaatgccgactggcgacgatgtaa
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