Jeongeupia sp. USM3: BJP62_15925
Help
Entry
BJP62_15925 CDS
T04552
Name
(GenBank) exodeoxyribonuclease V subunit alpha
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
jeu
Jeongeupia sp. USM3
Pathway
jeu03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
jeu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
BJP62_15925
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
jeu03400
]
BJP62_15925
Enzymes [BR:
jeu01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
BJP62_15925
DNA repair and recombination proteins [BR:
jeu03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
BJP62_15925
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecD_N
AAA_19
AAA_30
UvrD_C_2
AAA_11
Viral_helicase1
Helicase_RecD
AAA_22
SH3_13
UvrD-helicase
SLFN-g3_helicase
AAA_16
NTPase_1
nSTAND3
AAA_28
T2SSE
PhoH
Motif
Other DBs
NCBI-ProteinID:
AOY01807
UniProt:
A0A1D9BH73
LinkDB
All DBs
Position
3368677..3370656
Genome browser
AA seq
659 aa
AA seq
DB search
MTMNDMLALLAAWAERGWLRALDHAFAAFLAGEAPDADPLAILAAALASHQLGRGHVCLD
LEATLADSSFVLSLPPDGDESDALLPAAVLAGVDLPRWRQALQHPALVAAGDGNTPLVLA
GPRLYLRRYWRYECDVRDAITARLADGERLRATLPPSRAALDVLFPKTGDRSDWQKLACA
LAAGNAFSIITGGPGTGKTTTVVKLLALLQHLALGHGGALRIRLAAPTGKAAARLNESIA
GAVQKLALAGLPDGERVRAAIPTEVTTLHRLLRPMPDSRRFRHHAGNPLALDVLVIDEAS
MIDLEMMASVLAALPPAARLILLGDKDQLASVEAGAVLGELCRHAREGRYTPATRDWLFA
ATGEDIDPQLLDLVGGDLDQAVAMLRHSHRFSADSGIGQLAEAVNDGDIKTVRRVWEQGH
ADLARLPANTALRPLVVDGAADGALARFAGDDKPVGYRHYLELLRREQPPATAGQDVFDD
WARAVLKAHGQFQILCALRRGPWGVEGLNRRIAALLHEDGLLPAHQGWYLGRPVLVTSND
YGLKLMNGDVGITLALPHDGGWQLRVAFPSGDGGIRWVLPSRLQAVETVFAMTVHKSQGS
EFTHAALLLPDRLNPVLTRELVYTGITRARRWFSLVGDRKVFDAAIARRVQRASGLLDG
NT seq
1980 nt
NT seq
+upstream
nt +downstream
nt
atgacgatgaacgacatgctggcgctgctcgccgcctgggccgaacgcggctggctgcgc
gcgctcgaccacgcctttgccgccttcctcgccggcgaggcgcccgacgccgacccgctg
gccatcctcgccgcggcgctcgccagccaccagctcggtcgcggccacgtctgcctcgac
ctggaggcgacactggccgacagcagcttcgtgctgtccttgccgcccgacggcgacgag
agcgacgcgctgctgccggccgcggtgctcgccggcgtcgacctgccgcgctggcggcag
gcgctgcagcacccggcgctggtcgccgccggcgacggcaacacgccgctggtgctggcc
gggccgcggctctacctgcgccgctactggcgctacgagtgcgatgtccgcgatgcgatc
acggcgcggctggccgatggcgaacggctccgggccacgctgccgccgtcgcgcgccgcg
ctcgacgtgctgttccccaagaccggggaccgcagcgactggcagaagctcgcgtgcgcg
ctggcggccggcaacgcattcagcatcatcaccggcggccccggcaccggcaagacgacg
acggtcgtcaagctcctggcgctgctgcagcatctggcgctcggacacggcggtgccttg
cgcatccggcttgccgcaccgaccggcaaggcagcggcgcggctgaacgagtcgatcgcc
ggcgcggtgcagaagctggcgctggccggcctgcccgatggcgagcgcgtccgcgcggcg
atcccgaccgaggtgacgacgctgcaccggctcctgcggccgatgccggacagccggcgc
ttccgccaccacgccggcaacccgctggcgctcgacgtgctggtgatcgacgaagcgtcg
atgatcgatctggaaatgatggccagcgtgctcgcagcgctgccgccagcggcgcggctg
atcctgctcggcgacaaggaccagctcgcctcggtcgaggccggcgcggtgctcggcgag
ctgtgccggcacgcgcgcgagggccgctacacgccggcaacgcgcgactggctgtttgcg
gcaaccggcgaggacatcgacccgcaactgctcgatctggtcggcggcgatctggaccag
gcggtggcgatgctcaggcacagccaccgcttcagcgccgatagcggcatcggccagttg
gccgaagcggtgaacgatggcgacatcaagacggtgcggcgagtctgggagcaaggccat
gccgacctggcgcgcttgccggcgaacaccgcgctgcgccccctggtggtcgatggcgcg
gccgacggtgcgctggcccgcttcgccggcgacgacaaaccggtcggctaccggcattac
ctcgaactgctgaggcgcgagcagccgccggccaccgccgggcaggacgtgttcgacgac
tgggcgcgcgcggtgctgaaggcgcacggccagttccagattctgtgcgcgctgcggcgc
gggccgtggggcgtcgaggggctgaaccggcgcatcgcggcgctgctgcacgaggatggg
ctgctgccggcgcatcagggctggtatctcggccggccggtgctggtgaccagtaacgac
tacgggctgaagctgatgaacggcgacgtcggcatcacgctggcgctgccgcatgacggc
ggctggcagctccgggtcgcgtttccgtccggcgacggcggcatccgctgggtgttgccg
agccggctgcaggcggtcgagaccgtgttcgcgatgacggtgcacaagtcgcaggggtcg
gagttcacccatgcggcgctgctgctgcccgaccggctgaacccggtgctgacgcgcgaa
ctcgtctacaccggcatcacccgcgcgcgccgctggttcagcctcgtgggcgaccgcaag
gtgttcgacgcggcgatcgcgcggcgggtccagcgcgccagcggcctgctcgacggctag
DBGET
integrated database retrieval system
