Jiella pelagia: OH818_19495
Help
Entry
OH818_19495 CDS
T08667
Name
(GenBank) helicase-related protein
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
jie
Jiella pelagia
Pathway
jie03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
jie00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
OH818_19495
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
jie03019
]
OH818_19495
Enzymes [BR:
jie01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
OH818_19495
Messenger RNA biogenesis [BR:
jie03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
OH818_19495
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C
DEAD
CMS1
Utp25_C
Motif
Other DBs
NCBI-ProteinID:
WAP71256
LinkDB
All DBs
Position
complement(3828828..3829865)
Genome browser
AA seq
345 aa
AA seq
DB search
MTHTTVFGGVSIRPQIMTLGRGVDIVIATPGRLLDLLNQRAIDLSGVEHVVLDEADRMLD
MGFVRDVMKIVAKLPSERQSLLFSATMPRSIGDLAAKILTKPVRVEVTPEVVTVEKIAQS
VFLVPQKAKKHWLIDKLSDQSLSRVVIFTRTKHGANRLAGDLEKAGIPALAIHGNKSQAA
RQKALASFQKGSARVLVATDIVARGIHVDEISHVVNFELPEEPESYVHRIGRTARAGHSG
IAISLIDPSERAKLKAIARLTGQTLEPQKTDFVVPEGAMNEADERPARDARSPRGRNGQQ
QRRGNGAQGAPRSANGGENRRQDKPGGNRRRSGGGGGQRRAVAGA
NT seq
1038 nt
NT seq
+upstream
nt +downstream
nt
atcacccacacgacggtcttcggcggcgtctcgatccgtccgcagatcatgacgctcggc
cgcggcgtcgacatcgtcattgccacgccgggccggttgctcgacctcctcaaccagcgc
gccatcgacctttcgggcgtcgagcacgtcgttctcgacgaggccgaccggatgctcgac
atgggcttcgtgcgcgacgtcatgaagatcgtcgccaagctgccatccgagcgccagtcg
ctgctgttctccgcgaccatgccgcgctcgatcggcgatctcgccgcgaagatcctgacg
aagccggtgcgcgtcgaagtgacgccggaagtcgtgacggtggaaaagatcgcccagagc
gtcttcctggtcccccagaaggccaagaagcactggctgatcgacaagctctccgaccag
agcctgtccagggtggtgatcttcacccgcaccaagcacggcgccaaccggctggccggc
gatctcgaaaaggccggcattccggccctggcgatccacggcaacaagagccaggcggcc
cggcagaaggcgctcgcctccttccagaagggctcggcccgggttctcgtcgccaccgac
atcgtcgcccgcggcatccatgtcgacgagatcagccatgtggtgaacttcgagctgccg
gaagagccggagagctacgtccaccgcatcggtcgcaccgcccgggcgggccattcgggt
atcgcgatctcgctgatcgatccgtccgagcgcgccaagctcaaggcgatcgcccggctg
acggggcagacgctggagccgcagaagaccgacttcgtcgtgccggaaggtgcgatgaac
gaggccgacgagcgcccggcgcgtgacgcccgctcgccgcgcggccgcaatgggcagcag
cagcgccgcggcaatggcgcacagggcgcgccgcgcagcgccaatggcggcgagaaccgc
cgccaggacaagccgggcggcaaccgtcgccgcagcggtggcggtggtggtcagcgccgg
gccgtcgccggcgcctga
DBGET
integrated database retrieval system
