Janibacter limosus: EXU32_00280
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Entry
EXU32_00280 CDS
T05853
Name
(GenBank) mismatch-specific DNA-glycosylase
KO
K03649
double-stranded uracil-DNA glycosylase [EC:
3.2.2.28
]
Organism
jli
Janibacter limosus
Pathway
jli03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
jli00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
EXU32_00280
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
jli03400
]
EXU32_00280
Enzymes [BR:
jli01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.28 double-stranded uracil-DNA glycosylase
EXU32_00280
DNA repair and recombination proteins [BR:
jli03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
EXU32_00280
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
QBF44846
UniProt:
A0A4P6MQ67
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All DBs
Position
complement(57611..58204)
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AA seq
197 aa
AA seq
DB search
MADTRSTPTRAELESFRDAEVPDLLPERGQVLRLLFVGINPGLWTAATQTHFAHPGNRFY
PALLRAGIIERRIDPSAGMTDEDRSDLRARGIGVTNIVRRATARADELTPAELREGGERL
RATVRGARPTVVAVAGITAYRSAFGARSARVGEQAEGFEGARLWVVPNPSGLNAHETVQS
LALAYAEPARAAGLLDD
NT seq
594 nt
NT seq
+upstream
nt +downstream
nt
atggcggacacccgaagcacacccacccgcgccgagctcgagtccttccgggacgccgag
gtgccggacctgctccctgagcgggggcaggtcctgcggctgctcttcgtcggcatcaac
cccgggctgtggaccgccgcgacccagacccacttcgcccaccccggcaaccgcttctac
cccgccctgctccgggcggggatcatcgagcggcggatcgacccgtcggcgggcatgacc
gacgaggaccggtccgacctgcgggcccggggcatcggcgtcaccaacatcgtgcggcgg
gcgacggcccgcgccgacgagctgacgcccgcggagctgcgcgagggcggcgagcgtctg
cgggccaccgtgcgcggggcccgaccgacggtggtggccgtggcagggatcaccgcctac
cggagcgccttcggtgcgcgctcggcgcgggtcggcgagcaggccgaaggcttcgagggg
gcccggctgtgggtcgtccccaaccccagcggactcaacgctcacgagacggtgcagtcc
ctcgccctggcctacgccgagcccgcccgggcggcgggcctgctcgacgactga
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