Janibacter limosus: EXU32_01470
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Entry
EXU32_01470 CDS
T05853
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
jli
Janibacter limosus
Brite
KEGG Orthology (KO) [BR:
jli00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
jli03032
]
EXU32_01470 (topA)
03400 DNA repair and recombination proteins [BR:
jli03400
]
EXU32_01470 (topA)
Enzymes [BR:
jli01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
EXU32_01470 (topA)
DNA replication proteins [BR:
jli03032
]
Prokaryotic type
DNA Topoisomerases
EXU32_01470 (topA)
DNA repair and recombination proteins [BR:
jli03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
EXU32_01470 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
Toprim_4
Toprim_2
Motif
Other DBs
NCBI-ProteinID:
QBF45051
UniProt:
A0A4P6MNK4
LinkDB
All DBs
Position
300611..303391
Genome browser
AA seq
926 aa
AA seq
DB search
MATKLVIVESPAKAKTIGGYLGSDYVVEASVGHIRDIPTPSEMPAEMKKGPFGRFGINIE
EGFEPFYVVDPDKKKKVAELKRLLKDADTLYLATDEDREGEAIAWHLLETLKPKVPVKRM
VFHEITKEAIQRAVEETRELDIDLVNAQETRRILDRLYGYEVSPVLWRKVKAGLSAGRVQ
SVATRIVVERERERMAFKVASYWSVEGTFSSTSAPFAARLASLDGTKVATGSDFDDTGSL
KGTARQLDERAATAVAEATIAAAVTVSSVTEKPYTRRPYAPFTTSTLQQEAGRKLGLGAK
AAMGVAQKLYENGYITYMRTDSTNLSGSAIAAARGQARDMYGADFVPESPRVYGKKSKNA
QEAHEAIRPAGDRFRTPAQVAGELRGDQFKLYELIWKRTVASQMADAKGSTATIKLGADL
GGCEVATTAEYSASGTVITFKGFLAAYEEGTDEPRESKKDGEARLPKLSEGAAVDVVDAN
ASGHETSPPARYTEASLVKKMEELGIGRPSTYASTISTIQDRGYVRKKGSALAPTWLAFA
VTRLMEVHFSRLVDYRFTASMEEDLDEIASGSAERVAWLQRFYYGDGQGSEGLASLVSDL
GDIDARAISTIDIGDGIVVRVGRYGPYVEEVVPKGVDPATGEVTDETKTTPAPKRATIND
DVAPDELTPAMAREFLAAAADDGRVLGQDPETGREVIVKNGRYGPFVTEVLEEAADDKPK
RGKAKAKPRTASLFKSMDPATVDLEQALRLLSLPRTLGTVTETTTAEDGTETQVEVPITA
QNGRYGPYLKKGTDSRSIETEEQIFAMTLEEALAIYAQPKQRGRAAAKPPLAEFGEDPVS
GKKVVVKDGRFGPYVTDGETNATLRRDDEPETLTAERAYELIAEKRAKGPSTRKKSAKKA
TKKAAKKTVKKAAAKKTAKKTAAKKS
NT seq
2781 nt
NT seq
+upstream
nt +downstream
nt
atggccaccaagctcgtcatcgtggagtcacccgccaaggccaagaccattggtgggtac
ctcggctcggactacgtcgtcgaggcgtcggtgggccacatccgcgacatcccgaccccc
tccgagatgccggcggagatgaagaagggccccttcggccgcttcgggatcaacatcgag
gagggcttcgagcccttctacgtcgtcgacccggacaagaagaagaaggtcgccgagctc
aagcgcctgctcaaggacgccgacaccctctacctcgccacagatgaggaccgtgagggc
gaggccatcgcctggcacctcctcgagacactcaagcccaaggtccccgtgaagcggatg
gtcttccacgagatcaccaaggaggccatccagcgcgcggtcgaggagacccgcgagctg
gacatcgacctggtcaacgcccaggagacccgccgcatcctcgaccgtctctacggctac
gaggtctcgccggtcctgtggcgcaaggtcaaggcaggcctgtccgccggtcgcgtccag
tcggtcgcgacccgcatcgtcgtcgagcgtgagcgcgagcggatggccttcaaggtcgcc
tcgtactggagcgtcgagggcaccttcagctcgacgtccgctcccttcgccgcacggctt
gcctccctcgacgggaccaaggtcgccaccggaagcgacttcgacgacaccggatcgctc
aagggcaccgcccggcagctggacgagcgggccgcgaccgcggtcgccgaggccacgatc
gccgccgcggtcacggtctcgtccgtcacggagaagccctacacccgccggccgtacgcc
cccttcaccacctcgacgctgcagcaggaggccggtcgcaagctcggcctgggcgccaag
gcggccatgggcgtggcgcagaagctgtacgagaacggctacatcacctacatgcgtacc
gacagcaccaacctgtcgggctccgcgatcgctgccgcccgcggccaggccagggacatg
tacggcgccgacttcgtcccggagtcgccgcgtgtctacggcaagaagtcgaagaacgcc
caggaggcgcacgaggcgatccgccccgccggggaccgcttccgcacccccgcccaggtg
gccggcgagctgcgcggtgaccagttcaagctctacgagctgatctggaagcggaccgtc
gcctcgcagatggccgacgccaagggctcgaccgcgacgatcaagctgggcgccgacctc
ggcgggtgcgaggtcgccacgacggccgagtactcggcctcgggcacggtcatcaccttc
aagggcttcctggccgcctacgaggagggcaccgacgagccgcgagagtccaagaaggac
ggcgaggcacgtctgccgaagctctccgagggcgcagcggtcgacgtcgtcgacgccaac
gcctcggggcacgagacctcgccgcccgcgcgctacaccgaggcctccctcgtgaagaag
atggaagagctcggcatcggccgaccctccacctatgcctcgacgatcagcaccatccag
gaccgtgggtacgtccgcaagaaggggagtgccctggctccgacgtggctcgccttcgcc
gtgacccggctcatggaggtccacttcagccgcctcgtcgactaccgcttcaccgcctcg
atggaggaggacctcgacgagatcgcctccggctcggccgagcgggtggcgtggctgcag
cgcttctactacggcgacggccagggcagcgaggggctcgccagcctcgtctcggacctg
ggcgacatcgacgcccgcgcgatctcgacgatcgacatcggcgacggcatcgtcgtccgc
gtcggtcggtacggcccgtacgtcgaggaggtcgtgccgaagggggttgaccctgccacc
ggtgaggtcaccgacgagaccaagacgacgccggcgcccaagcgggcgacgatcaacgac
gacgtggcccccgacgagctgacgccggcgatggcccgcgagttcctcgcggccgctgcc
gacgacgggcgggtgctcgggcaggaccccgagaccggtcgcgaggtcatcgtcaagaac
ggccgctacgggcccttcgtcaccgaggtgctcgaggaggccgcggacgacaagcccaag
cgtggcaaggcgaaggccaagccgcgcacggcctcgctcttcaagagcatggacccggcc
accgtcgacctggagcaggcgctgcgcctgctctcccttcctcgcaccctcggcacggtc
accgagaccacgaccgcggaggacggcaccgagacgcaggtcgaggtgccgatcacggcg
cagaacggccgctacggcccgtacctgaagaaggggaccgactcgcgctcgatcgagacc
gaggagcagatcttcgcgatgaccctcgaggaggcgctcgcgatctatgcccagcccaag
cagcgtgggcgggccgccgccaagccgcccctggccgagttcggcgaggacccggtgagc
ggcaagaaggtcgtcgtcaaggacggtcgcttcggtccctacgtcaccgacggtgagaca
aatgccacgctgcgccgtgacgacgagcccgagacgctcactgccgagcgggcctacgag
ctgatcgcggagaagcgggccaaggggcccagcacccgcaagaagtcggcgaagaaggcg
accaagaaggccgcgaagaagaccgtgaagaaggccgcggcgaagaagaccgccaagaag
acggcggccaagaagtcctga
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