Janibacter limosus: EXU32_01535
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Entry
EXU32_01535 CDS
T05853
Symbol
dacB
Name
(GenBank) D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase
KO
K07259
serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:
3.4.16.4
3.4.21.-]
Organism
jli
Janibacter limosus
Pathway
jli00550
Peptidoglycan biosynthesis
jli01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
jli00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
EXU32_01535 (dacB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
jli01002
]
EXU32_01535 (dacB)
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
jli01011
]
EXU32_01535 (dacB)
Enzymes [BR:
jli01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
EXU32_01535 (dacB)
Peptidases and inhibitors [BR:
jli01002
]
Serine peptidases
Family S13: D-Ala-D-Ala peptidase C family
EXU32_01535 (dacB)
Peptidoglycan biosynthesis and degradation proteins [BR:
jli01011
]
Peptidoglycan biosynthesis and degradation
DD-Carboxypeptidase/DD-Endopeptidase (Low molecular weight PBP)
EXU32_01535 (dacB)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Peptidase_S13
Beta-lactamase2
Peptidase_S11
Robl_LC7
Motif
Other DBs
NCBI-ProteinID:
QBF45063
UniProt:
A0A4P6MUV6
LinkDB
All DBs
Position
314225..315619
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AA seq
464 aa
AA seq
DB search
MRRALIALTSVAALVVGYGVADANDRVPGVLTIDEAVSEQVPRPVEPAVVLPPASKSAPA
PTDAGITRALRDDVRDKQLGPRVGVVVRDALTGETLYSLGEDRPQTPASTAKLLTAAAVA
ERADLSTTMTTTVVRGEGDELVLVASGDTMLAKGAGDPTTVEGRAGLADLAKQVAASLGT
KGGARHSLRLDATYAAGERYAPTWDMADVAAGYTQGVSMVGLAGDRPEPFKPSPRFPEKA
VLKAFAAQLKKAGVTVSVDDSAASWKQAAPQGAEQLGAVESAPLGDVLALALDHSDNALT
ENVARQAAVADGAGSSFAEVTAWVRSTLEGAGIDLTGVRLKDNSGLSSGQVVPARVTSDV
MQLGITGSAQTMSLVLSELPIAGLTGTLHERFQTSASHAAAGIARAKTGTLTGTSALAGT
TTTQEGRLLSFVLVADRVPSTTGTLGARAALDKIVADLTACGCR
NT seq
1395 nt
NT seq
+upstream
nt +downstream
nt
gtgcgccgcgcactgatcgcactgacctctgtcgcagccctcgtcgtgggctacggcgtg
gccgacgccaacgaccgggtcccgggcgtcctgacgatcgacgaggccgtctccgagcag
gtcccccggccggtcgagccggccgtggtcctgccgcccgcgtccaagagcgcgcctgca
ccgaccgacgccggcatcacccgggccctgcgcgacgacgtccgcgacaagcagctcggg
ccccgcgtcggtgtcgtcgtgcgcgacgcactgaccggcgagaccctctactccctcggc
gaggaccgcccccagacgcccgcctcgacggccaagctcctcacggctgccgcggtcgcc
gagcgcgccgacctgagcacgaccatgaccaccacggtggtgcgcggcgagggcgacgag
ctcgtcctcgtcgcctccggggacacgatgctcgccaagggcgcgggcgacccgaccacg
gtcgagggccgggccggcctggccgacctggccaagcaggtcgccgcctccctggggacg
aaggggggagcccgccactcccttcgcctcgacgccacgtacgcggccggcgagcgctac
gcgccgacgtgggacatggccgacgtcgccgccggctacacccagggcgtgtcgatggtg
ggcctcgccggcgaccgacccgagcccttcaaaccttcgccacgcttcccggagaaggcc
gtcctcaaggccttcgcggcccagctgaagaaggcgggcgtcacggtctccgtcgacgac
tcggccgcgtcgtggaagcaggcggccccgcagggtgccgagcagctcggggccgtggag
tcggcgcccctgggcgacgtgctcgccctcgcgctcgaccacagcgacaacgccctgacc
gagaacgtcgcccggcaggccgccgtggccgacggcgccggctcgtccttcgccgaggtg
accgcctgggtgcgctccaccctcgagggggccgggatcgacctcaccggcgtgcggctc
aaggacaacagcggcctcagctccggccaggtcgtgcccgcgcgggtgacctccgacgtg
atgcagctgggcatcaccgggtcggcgcagacgatgagcctggtcctgtcggagctgccg
atcgccgggctgaccgggaccctgcacgagcgcttccagaccagcgcctcgcacgccgcc
gcgggcatcgcccgggccaagaccggcaccctcacgggtacctcggcgctggcggggacg
acgacgacgcaggaggggcgactgctgtccttcgtgctcgtcgccgatcgcgtcccttcg
acaacgggcaccctgggcgctcgggcggccctcgacaagatcgtggccgacctgaccgcc
tgcggctgccgctga
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