Janibacter limosus: EXU32_02580
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Entry
EXU32_02580 CDS
T05853
Symbol
pcrA
Name
(GenBank) DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
jli
Janibacter limosus
Pathway
jli03420
Nucleotide excision repair
jli03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
jli00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
EXU32_02580 (pcrA)
03430 Mismatch repair
EXU32_02580 (pcrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
jli03400
]
EXU32_02580 (pcrA)
Enzymes [BR:
jli01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
EXU32_02580 (pcrA)
DNA repair and recombination proteins [BR:
jli03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
EXU32_02580 (pcrA)
MMR (mismatch excision repair)
Other MMR factors
EXU32_02580 (pcrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
AAA_11
AAA_30
Viral_helicase1
DEAD
ResIII
Motif
Other DBs
NCBI-ProteinID:
QBF45250
UniProt:
A0A4P6MUQ5
LinkDB
All DBs
Position
522386..524833
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AA seq
815 aa
AA seq
DB search
MSSLFDDLPDALPGDWSQEVTDTGVPTWAMSDEGPTRAAHSRHHTPVQRDPEELVAGLNP
GQREAVLHAGGPLLIIAGAGSGKTRVLTHRIAHLLGARGVQPGQILAITFTNKAAAEMRE
RVEDLVGPRAKAMWVLTFHSACVRILRREAGKVGMKSSFSIYDAADSQRLVAMVMRDLDL
DPKRYPPRSLGHRISNLKNELVDEEEFARRASVDEDAQTGGTQQDQILAQVYTEYQRRLR
QANALDFDDIIMTTVHILQAFPDVAEHYRRRFRHVLVDEYQDTNHAQYMLVRELVGGDKD
AARSDHSVEPSELVVVGDADQSIYAFRGASIRNIVEFEEDYPDARTILLEQNYRSTQTIL
SAANAVIERNESRRKKNLWTQAGAGEQIVGYVGDNEHDEASFIAKTIDDLHDAHGVRPGD
VAVFYRTNAQSRAIEEIFVRTGLPYKVVGGTRFYERREVKDALAYLRVVTNPADTVNMRR
IINTPKRGIGDRAQLAVAQLAERERIPFVAALGRVEDAPGIATRSVKAVKGFTALLEALG
ELHQGGAGIGDLLEAVLERSGYVSELQASRDPQDETRLENLAELVGVAREFDATREATGE
VISLDDFLEQVSLVADADEIPDGGEGEEQGVVTLMTLHTAKGLEFPVVFLTGMEDGTFPH
QRSLANATELEEERRLAYVGITRARERLHLSRSAVRSAFGTPQYNPASRFLDEIPADLVR
WERTGPPLGGFGGSGSRDGRQPAVARLAARPGVRSPGNRPVIALADGDKVTHDSFGLGTV
IRVEGEGDKSMAHVDFGGEDGVKRLLLRYAPLEKL
NT seq
2448 nt
NT seq
+upstream
nt +downstream
nt
atgagcagccttttcgacgaccttcccgatgccctgcccggtgactggagccaggaggtc
accgataccggtgtccccacctgggcgatgagtgacgagggtccgacccgggccgcgcac
agccggcaccacactcccgtccagcgggacccggaggagctggtcgccggcctcaacccg
ggccagcgcgaggcggtcctgcacgcgggcggcccgctgctcatcatcgccggggccggc
tcgggcaagacccgggtgctgacccaccgcatcgcccacctgctcggtgcccggggcgtc
cagccgggccagatcctggcgatcaccttcaccaacaaggccgccgccgagatgcgtgag
cgcgtcgaggacctcgtcggcccccgggccaaggcgatgtgggtcctgaccttccactcc
gcgtgcgtgcgcatcctgcgccgcgaggccggcaaggtcgggatgaagagcagcttctcg
atctacgacgccgccgacagccagcgcctcgtcgccatggtcatgcgcgacctcgacctg
gaccccaagcgctacccgccacgctccctgggccaccggatcagcaacctcaagaacgag
ctggtcgacgaggaggagttcgcccggcgtgcgtcggtcgacgaggacgcgcagaccggc
gggacccagcaggaccagatcctggcgcaggtctacaccgagtaccagcgccggctgcgg
caggccaacgcgctcgacttcgacgacatcatcatgacgaccgtgcacatcctgcaggcc
ttccccgatgtcgccgagcactaccgtcgccgcttccgccacgtgctcgtcgacgagtac
caggacaccaaccacgcgcagtacatgctcgtgcgggagctggtcggcggggacaaggac
gcggcccgctcggaccactccgtcgagccgagcgagctggtcgtcgtcggtgacgccgac
cagtcgatctatgccttccgcggcgcctcgatccgcaacatcgtcgagttcgaggaggac
tacccggacgcccgcacgatcctcctcgagcaaaactaccgctcgacccagacgatcctc
agcgcggccaatgccgtcatcgagcgcaacgagtcccggcgaaagaaaaacctgtggacg
caggcgggggccggcgagcagatcgtcggctacgtcggggacaacgagcacgacgaggcc
tccttcatcgccaagaccatcgacgacctgcacgacgcgcacggggtgcgccccggcgat
gtcgcggtcttctaccggaccaacgcgcagtcccgcgcgatcgaggagatcttcgtccgg
acggggctgccctacaaggtcgtcggcggcacccgcttctacgagcgaagggaggtcaag
gacgccttggcctacctgcgggtggtcaccaacccggccgacacggtcaacatgcgccgg
atcatcaacacccccaagcggggcatcggtgaccgggcccagctcgccgtcgcccagctc
gccgagcgcgagcggatccccttcgtcgccgcgctgggcagggtcgaggacgcgccgggc
atcgcgacccgctcggtcaaggcggtcaaggggttcaccgccctgctcgaggcgctgggc
gagctccaccaagggggcgccggcatcggtgacctcctcgaggccgtgctcgagcgcagt
ggttatgtcagcgagctgcaggccagccgtgacccccaggacgagacccggctggaaaac
ctggcggagctcgtcggtgtcgcccgtgagttcgacgcgacccgtgaggccaccggtgag
gtcatcagcctcgacgacttcctcgagcaggtcagcctcgtggccgatgccgacgagatc
cccgacggaggtgagggcgaggagcagggggtggtcaccctcatgacgctgcacacggcc
aagggcctggagttccccgtcgtcttcctcaccggcatggaggacggcaccttcccccac
cagcgcagtctggccaacgccaccgagctcgaggaggagcgccgtctggcctatgtgggc
atcacccgcgcccgcgagcggctgcacctgtcccggtcagcggtgcgcagcgccttcggc
acgccgcagtacaacccggcctcacgcttcctcgacgagatccccgcggacctcgtgcgg
tgggagcgcaccggcccaccgctcggtggcttcggcggatccggctcccgtgacggtcgc
cagcccgcggtcgcccgcctggccgctcggcccggcgtgcgctcgccgggcaaccggccg
gtcatcgccctcgcggacggcgacaaggtcacccacgacagcttcggcctcggcaccgtc
atccgggtcgagggcgagggcgacaagtcgatggcccacgtcgacttcgggggagaggac
ggcgtcaagcggctgctgctgcgctacgcccccctcgaaaagctctga
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