Janibacter limosus: EXU32_04405
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Entry
EXU32_04405 CDS
T05853
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
jli
Janibacter limosus
Brite
KEGG Orthology (KO) [BR:
jli00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
jli03009
]
EXU32_04405 (rimO)
Enzymes [BR:
jli01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
EXU32_04405 (rimO)
Ribosome biogenesis [BR:
jli03009
]
Prokaryotic type
ribosomal protein modification factors
EXU32_04405 (rimO)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM_2
CLP1_P
Motif
Other DBs
NCBI-ProteinID:
QBF45573
UniProt:
A0A4P6MW55
LinkDB
All DBs
Position
906822..908228
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AA seq
468 aa
AA seq
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MSVPSRSVALVTLGCTRNDVDSEELAGRLSAEGWTLVDDAAQADVAVVNTCGFIEQAKKD
SIDAILEASDLREHGRTQKVVAVGCLAERYGKELADELPEADAVLGFDSYADMSSHLRAV
LDGHAPEAHTPGDRRKLLPISPVDRDASDVALPGHNTGGDLPRARLDDRPWAPLKIASGC
DRRCSFCAIPTFRGAFVSRRPSDVVAEGRWLASQGVRELFLVSENSTSYGKDLGDLDLME
ALLPELVAIEGVERVRVSYLQPAEIRPGLLRAMASIPGVVPWYDISFQHASGPLLRRMRR
FGDTDAFLSLIDGIRERQPEAGIRSNVILGFPGETEADVDELERFLLAARLDVVGVFGYS
DEDGTEGELLDGKIDADTIAERVERIRDLVEELTAQRAEERIGEVLQVLVEEVDAETGEM
SGRAEHQGPDVDGVTLLAGDLSGVEVGALVTAVVVGTEGIDLVAEVNR
NT seq
1407 nt
NT seq
+upstream
nt +downstream
nt
atgtccgtcccctcccgcagcgtcgccctcgtcaccctgggctgtacccgtaacgacgtg
gactccgaggagctcgccggccgcctgtccgccgagggttggaccctcgtcgacgatgct
gcgcaggccgatgtcgccgtcgtcaacacctgcggcttcatcgagcaggccaagaaggac
tcgatcgacgcgatcctcgaggcgagtgacctgcgcgagcacggcaggacgcagaaggtc
gtggccgtcggctgcctcgcggagcgctacggcaaggagctggccgacgagctgcccgag
gccgacgccgtgctcggcttcgactcctacgccgacatgtccagccacctgcgcgccgtc
ctcgacggtcacgcacccgaggcgcacacgcccggcgaccgtcgcaagctgctgcccatc
tccccggtcgaccgcgacgccagcgacgtcgccctcccggggcacaacacgggcggcgac
ctgccccgggcccggctcgacgaccggccctgggccccgctcaagatcgcctcgggctgc
gaccgccgctgctccttctgcgccatcccgaccttccgcggggccttcgtctcacgtcgc
ccgagcgatgtcgtggccgaagggaggtggctcgcctcccagggggtgcgcgagctcttc
ctcgtcagcgagaactccacgtcctacggcaaggacctcggcgacctcgacctgatggag
gcgctgctgcccgagctggtggccatcgagggcgtcgagcgggtgcgggtgtcctacctg
cagcccgccgagatccgtcccgggctgctgcgggccatggcgagcatccccggggtcgtc
ccgtggtacgacatctccttccagcacgcgtcggggccgctcctgcgccggatgcggcgc
ttcggcgacaccgacgccttcctctcgctcatcgacggcatccgtgagcgccagcctgag
gccggtatccgctccaatgtcatcctcggcttccccggcgagaccgaggccgatgtcgac
gagctcgagcgcttcctcctcgccgcccgcctcgacgtcgtgggcgtcttcgggtactcc
gacgaggacggcaccgagggcgagctgctcgacggcaagatcgacgcggacaccatcgcc
gagcgcgtcgagcgcatccgggacctcgtcgaggagctgaccgcccagcgcgccgaggag
cgcatcggcgaggtcctgcaggtcctcgtcgaggaggtcgacgcggagaccggcgagatg
agcggccgggccgagcaccagggacccgacgtcgacggggtcacgctgctcgccggtgac
ctctccggggtcgaggtgggtgcgctcgtcaccgcggtggtggtcggcaccgaaggcatc
gacctcgtcgcagaggtcaaccggtga
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