Janibacter limosus: EXU32_05850
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Entry
EXU32_05850 CDS
T05853
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
jli
Janibacter limosus
Pathway
jli03030
DNA replication
jli03410
Base excision repair
jli03420
Nucleotide excision repair
jli03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
jli00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
EXU32_05850 (polA)
03410 Base excision repair
EXU32_05850 (polA)
03420 Nucleotide excision repair
EXU32_05850 (polA)
03440 Homologous recombination
EXU32_05850 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
jli03032
]
EXU32_05850 (polA)
03400 DNA repair and recombination proteins [BR:
jli03400
]
EXU32_05850 (polA)
Enzymes [BR:
jli01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
EXU32_05850 (polA)
DNA replication proteins [BR:
jli03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
EXU32_05850 (polA)
DNA repair and recombination proteins [BR:
jli03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
EXU32_05850 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
EXU32_05850 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_polI_exo1
DNA_pol_A_exo1
HHH_5
IMS_HHH
DNA_pol_lambd_f
HHH
Motif
Other DBs
NCBI-ProteinID:
QBF45820
UniProt:
A0A4P6MW54
LinkDB
All DBs
Position
1213669..1216335
Genome browser
AA seq
888 aa
AA seq
DB search
MSRLLLLDGHSLAYRAFFALPAENFSTSTGQHTNGVYGFVAMLINVLRDEEPTHVAVAFD
VSRANFRSAEYPEYKAGRSATPDAFSGQIPLLQEVLDALNITHVELDGYEADDVIATLVA
QGREAGMDVLICSGDRDTLQLVDEHSTVLYPKKGVSDLARMTPDAVTDKYGVGPQLYSDL
AALVGEASDNLPGVPGVGPKTAAKWLNAHGDLQGIVAAIDQIGGKAGQSLRDNIDQVLRN
RRLNGLLRDVPVPVGIEDLERREWDRERVHTLFDSLEFRVLRDRLFATFDTAESEVTGGV
EVDGRVLRAGEVAPWLAEHGTARLGVDVVGEWGRGRGEVTGLGLATVDGEAAFVDVPQLE
TEDEAALRAWLVDPERTKVLHDAKGPMLALASSGLPLAGLVVDTAIAAYLVRPDQRSYDL
GDLAVRHLGRDLSGGEDASDQGMLDFSADDSETGRTSMIRAAAAVELAPVLEEQVEETGG
SELMRAVELPVVGVLAQMETAGIAVDSDALTALESDFAAKVAAAQADAWAAIDDEQINLG
SPKQLQTVLFDTLGLPKTRKTKTGYTTDADALADLHAKTEHPFLEALLRHRDATRLRVTV
EGLIKSVADDGRIHTTYQQTIAATGRLSSTDPNLQNIPIRTEEGRRIREVFVVGSGYESL
MSADYSQVEMRVMAHLSGDEGLIEAFRTGEDLHRFVGARVFGVEPEGVTAEMRSKVKAMS
YGLAYGLSAFGLSKQLAISTGEATALMEEYFQRFGGVRDYLEEIVDRARATGYTETMLGR
RRYLPDLTSDNRQRRQMAERMALNAPIQGSAADIMKLAMLRVDRSIAQEGLASRVLLQVH
DELVLEVAPGEDEQVESLVRREMGSAVEMDVPLDVSVGRGRSWHEAAH
NT seq
2667 nt
NT seq
+upstream
nt +downstream
nt
gtgagtcgactactgctgctggacggacattccctcgcctaccgggccttcttcgcgctg
cctgcggagaacttctcgacgagcaccgggcagcacaccaacggcgtctacggcttcgtc
gccatgctgatcaacgtgctgcgcgacgaggagccgacccacgtggcggtcgccttcgac
gtctcccgcgccaacttccgcagcgcggagtaccccgagtacaaggccggccgcagcgcc
acgcccgacgccttctccgggcagatcccgctgctgcaggaggtcctcgacgcgctcaac
atcacccacgtcgagctcgacggctacgaggcggacgacgtcatcgcgaccctcgtcgcc
cagggccgtgaggcagggatggacgtcctgatctgctccggcgaccgggacaccctccag
ctcgtcgacgagcactcgaccgtcctctaccccaagaagggcgtgtcggacctggcccgc
atgacgcccgacgccgtcaccgacaagtacggggtgggtccgcagctctacagcgacctc
gccgcactcgtcggggaggcgagcgacaacctcccgggtgtgcccggggtgggccccaag
accgcggccaagtggctcaacgcccacggcgacctccagggcatcgtggccgccatcgac
cagatcggcggcaaggccggccagtcgctgcgcgacaacatcgaccaggtcctgcgcaac
cgccgactcaacggcctgctgcgcgacgtgccggtgccggtgggcatcgaggacctggag
cgaagggagtgggaccgcgagcgggtgcacaccctcttcgacagcctcgagttccgggtc
ctgcgggatcgtctcttcgccaccttcgacaccgccgagtccgaggtcaccggcggggtc
gaggtcgatggtcgcgtcctgcgcgcgggcgaggtggcgccgtggctcgccgagcacggc
accgctcgcctgggcgtcgacgtcgtcggtgagtggggtaggggccgaggcgaggtgacc
gggctcggcctggccaccgtcgacggtgaggccgcattcgtcgacgtgccgcagctcgag
accgaggacgaggccgcgctgcgtgcctggctggtcgacccggagcgcaccaaggtgctg
cacgacgccaagggtccgatgctggcgctcgcgtcctcagggctgccgctggccggcctg
gtcgtcgacaccgccatcgccgcctacctcgtgcgtcccgaccagcgctcctacgacctc
ggcgacctggcggtgcgccacctcggccgtgacctgtccggcggcgaggatgcgtccgac
caggggatgctcgacttctcggccgatgactccgagacgggtcgcacctcgatgatccgg
gcggcggcagccgtcgagctcgcgcccgtgctcgaggagcaggtcgaggagaccggcggc
agcgagctgatgcgtgccgtggagcttcccgtcgtgggtgtgctcgcccagatggagacg
gcgggcatcgccgtcgactccgatgccctcaccgctctcgagtcggacttcgccgccaag
gtggccgcggcgcaggccgatgcctgggccgcgatcgacgacgagcagatcaacctgggt
tcgcccaagcagctgcagacggtcctcttcgacaccctcgggctacccaagacccgcaag
accaagaccggctacacgaccgacgccgatgcactggcggacctccacgccaagacggag
caccccttcctcgaggccctcctgcggcaccgcgacgccactcgcctgcgggtcaccgtc
gagggcctgatcaagtcggtggccgacgacgggcgcatccacacgacctaccagcagacg
atcgcggcgaccgggcggctgtcctcgaccgaccccaacctgcagaacatcccgatccgc
accgaggagggacgtcgcatccgcgaggtcttcgtcgtcgggtcgggctacgagtcgctg
atgtccgccgactacagccaggtcgagatgcgggtcatggcccacctgtcgggggacgag
gggctcatcgaggccttccgcacgggcgaggacctgcaccgcttcgtcggggcccgcgtc
ttcggggtcgagcccgagggcgtcacggcggagatgcgcagcaaggtcaaggccatgtcc
tacggcctcgcctacggcttgagcgccttcggtctgtccaagcagctggccatctccacg
ggcgaggccaccgcactcatggaggagtacttccagcgcttcggcggggtccgtgactac
ctcgaggagatcgtcgaccgcgcccgggcgaccgggtacaccgagacgatgctgggccgg
cgccggtacctgccggacctgacgagcgacaaccgtcagcgccgccagatggccgagcgg
atggcgctcaacgcaccgatccaggggtcggccgccgacatcatgaagctggcgatgctc
cgtgtcgaccggtccatcgcgcaggaggggctggcctcgcgcgtgctgctccaggtgcac
gacgagctcgtcctcgaggtggcgcccggcgaggacgagcaggtcgagtcgctggtgcgt
cgcgagatgggcagcgcggtcgagatggacgtccccctcgacgtgtcggtcggtcggggg
cgcagctggcacgaggccgcgcactga
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