Janibacter limosus: EXU32_07180
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Entry
EXU32_07180 CDS
T05853
Name
(GenBank) DEAD/DEAH box helicase
KO
K03727
ATP-dependent RNA helicase HelY [EC:
5.6.2.6
]
Organism
jli
Janibacter limosus
Brite
KEGG Orthology (KO) [BR:
jli00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
jli03019
]
EXU32_07180
Enzymes [BR:
jli01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
EXU32_07180
Messenger RNA biogenesis [BR:
jli03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
EXU32_07180
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DSHCT
DEAD
SH3_HelY
ResIII
Helicase_C
DEXQc_Suv3
MTR4-like_stalk
AAA_22
nSTAND_NTPase5
AAA_30
Motif
Other DBs
NCBI-ProteinID:
QBF46056
UniProt:
A0A4P6MT52
LinkDB
All DBs
Position
complement(1489835..1492681)
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AA seq
948 aa
AA seq
DB search
MSSPADRYAASRRRSGAELTAFAASVGFELDPFQIEACEAVEAGHGVLVAAPTGAGKTIV
GEFAVHMALARGQKAFYTTPIKALSNQKYHELAERHGHDNVGLLTGDTSVNGEAPIVVMT
TEVLRNMIYAGSTTLDTLAFVVMDEVHYLADRFRGAVWEEVIIHLPRSVQVISLSATVSN
AEEFGDWLAEVRGGTEVVVSEVRPVPLWQHMQVGRDVHDLFVDEEGAAQGSPAKVNPELL
DAIRDRVRSGGGDGPPHGGRGGPSGRGGHAGRGGRDRRGGRDGRDSQGRGGHGAPGPRGG
GGRFGGAASRTEVIRELDRDGLLPAITFIFSRAGCDAAVGQLLGNDVRLVSEREGERNRR
TVEERTAALEGEDLDVLGYHQFVEGISRGFAAHHAGMLPLFREVVEELFTAGRVRAVFAT
ETLALGINMPARTVVLEKLVKFNGESHVEITPAEYTQLTGRAGRRGIDVEGHALVVWSRG
MDPMAVAGLAQTRTYPLRSSFKPTYNMAVNLVAQVGRQTAKEVLETSFAQFQADRSVVGI
ATQVRDQQESLQAYADAMHCHVGDFREYAALRRRITDLEKEGSRKRNANRRAEIAISLEA
LRVGDIVRLGGRRAGVALVIAPPRSYKGESSAPTVLTEDKQVRRLTATDLDGPLTPFGRL
AVPKGFNPKSVRQRSDLAATLRVKAPHEDAPSVRRHAKESAKGDDERLEQLRRELKSHPC
HQCPEREDHARWADRWWKLKRDNSALQRKVEMRTNSVAQTFDRICTVLVQMGYLGEDGES
VTELGGRLRRLYTEKDLLAAECLRGGAWKRLDPAELAAVVSMLVHEPRRDEHEAFPRMPT
EGVSDAWLDMVRRWSELEDLEGVHALQQTGEPDGGLAWAVHRWASGRRLDEVLSGSDLTA
GDFVRRCKQVVDLLDQVGDAAPEPHLRGVARAAVDKVRRGVVAADRLD
NT seq
2847 nt
NT seq
+upstream
nt +downstream
nt
atgtcctcgcccgctgaccgatacgccgcctcccgccgacgcagcggcgcggagctgacc
gccttcgccgcgtccgtcggcttcgagctcgaccccttccagatcgaggcctgcgaggcc
gtcgaggccggtcacggggtcctcgtcgcggcgcccaccggtgccggcaagacgatcgtc
ggtgagttcgctgtgcacatggcgctggcccgcgggcagaaggccttctacaccacgccg
atcaaggccctgagcaaccagaagtaccacgagctcgccgagcggcacggccatgacaac
gtcggcctgctgaccggcgacacctccgtcaacggcgaggcgccgatcgtcgtcatgacg
accgaggtcctgcgcaacatgatctacgccgggtccacgacgctcgacacgctcgccttc
gtcgtcatggacgaggtgcactacctcgccgaccgcttccgtggggccgtctgggaggag
gtgatcatccacctgccccggtcggtccaggtgatctcgctgtcggcgacggtgagcaat
gccgaggagttcggcgactggctcgccgaggtccgtggcggcaccgaggtggtcgtctcc
gaggtgcgtccggtcccgctgtggcagcacatgcaggtcggtcgcgacgtgcacgacctc
ttcgtcgacgaggagggtgcggcgcagggctcaccggccaaggtcaacccggagctgctc
gacgcgatccgtgaccgggtgcgctccggtggcggtgacgggccaccgcacgggggtcga
ggtggcccctccggccggggcgggcacgcaggtcgcgggggacgtgaccgccgcggcggg
cgtgacggccgggactcacagggccgtggaggacacggtgcgcctggcccgcgcggggga
ggcggccgcttcggtggggccgcctcgcgcaccgaggtcatccgcgagctggaccgcgac
gggctgctgcccgccatcaccttcatcttcagccgagccggctgcgacgcagcggtcggc
cagctcctcggcaacgacgtccggctggtctccgagcgcgagggggagcgcaaccgtcgc
acggtcgaggagcgcaccgcggcgctcgagggcgaggacctcgacgtcctgggctaccac
cagttcgtcgagggcatctcgcgcggcttcgccgcccaccacgccgggatgctcccgctc
ttccgcgaggtcgtcgaggagctcttcaccgccggccgcgtccgagccgtcttcgcgacc
gagaccctcgccctgggcatcaacatgcccgcccgcaccgtggtgctggagaagctggtg
aagttcaacggcgagtcgcacgtcgagatcaccccggcggagtacacccagctcaccggc
cgcgccgggcgccgggggatcgacgtcgaggggcacgccctggtcgtgtggtcgcggggg
atggaccccatggcggtggccggtctcgcgcagacccggacctacccccttcgctccagc
ttcaagccgacgtacaacatggccgtcaacctcgtcgcgcaggtgggccggcagacggcc
aaggaggtgctggagacctccttcgcgcagttccaggccgaccggtccgtcgtgggcatc
gcgacccaggtgcgtgaccagcaggagtccctgcaggcctacgccgacgccatgcactgc
catgtcggcgacttccgcgagtacgcggcgctgcgccgccggatcaccgacctggagaag
gagggctcgcgcaagcgcaatgccaaccgccgggccgagatcgccatctcgctcgaggcg
ctgcgcgtcggtgacatcgtgcgcctgggtggccggcgggccggggtggccctcgtcatc
gcgccgccccgctcctacaagggggagtcgtccgctccgacggtcctcaccgaggacaag
caggtccgccgcctgacggccacggacctcgatgggccactcactcccttcggccggttg
gcggtgcccaaggggttcaaccccaagtcggtcaggcagcgctccgacctcgccgcgacg
ctgcgggtcaaggcaccccacgaggacgccccgagcgtgcggcggcacgccaaggagagc
gcgaagggggatgacgagcgcctcgagcagctgcggcgggagctgaagtcgcacccctgc
caccagtgcccggagcgggaggaccacgcccggtgggccgaccgctggtggaagctcaag
cgtgacaactcagccctgcagcgcaaggtggagatgcggaccaactcggtggcgcagacc
ttcgaccggatctgcaccgtgctcgtccagatggggtatctcggcgaggacggcgagagc
gtgaccgagctcgggggacggctgcgccgcctctacacggagaaggacctgctcgcggcc
gagtgcctgcgcggaggagcgtggaagcggctcgacccggccgagctggcggccgtcgtg
tcgatgctcgtccacgagccgcggcgtgacgagcacgaggccttcccccggatgcccacc
gagggggtctccgacgcctggctggacatggtccggcgctggagcgagctggaggacctg
gagggcgtgcacgccctgcagcagacgggtgagcccgacgggggactggcctgggcggtc
caccggtgggccagcggacggcgcctggacgaggtgctgtccgggtcggacctcaccgcc
ggtgacttcgtgcgccgctgcaagcaggtcgtcgacctgctcgaccaggtcggcgacgcg
gcccccgagccgcacctgcgcggcgtggcccgtgcggccgtcgacaaggtgaggcgcggg
gtcgtcgccgccgaccggctggactga
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