Janibacter limosus: EXU32_08765
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Entry
EXU32_08765 CDS
T05853
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
jli
Janibacter limosus
Pathway
jli03030
DNA replication
jli03430
Mismatch repair
jli03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
jli00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
EXU32_08765 (dnaE)
03430 Mismatch repair
EXU32_08765 (dnaE)
03440 Homologous recombination
EXU32_08765 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
jli03032
]
EXU32_08765 (dnaE)
03400 DNA repair and recombination proteins [BR:
jli03400
]
EXU32_08765 (dnaE)
Enzymes [BR:
jli01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
EXU32_08765 (dnaE)
DNA replication proteins [BR:
jli03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
EXU32_08765 (dnaE)
DNA repair and recombination proteins [BR:
jli03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
EXU32_08765 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
Intein_splicing
LAGLIDADG_3
tRNA_anti-codon
DNA_pol_IIIA_C
HHH_3
Hom_end
Motif
Other DBs
NCBI-ProteinID:
QBF46336
UniProt:
A0A4P6MTU0
LinkDB
All DBs
Position
complement(1823671..1828617)
Genome browser
AA seq
1648 aa
AA seq
DB search
MSELPRSENFVHLHNHTEYSMLDGAARIKDMFSTAQEMGMPAIAMTDHGYLFGAHEFWKT
AQSYDVKPIIGLEAYVAPGTHRTDKTRVKWGDERTNPRDDISGGGAYTHMTLLARNNTGM
HNLFRMGSRASLDSVFAKWPRLDRELLSQYGDGLVATTGCPSGEIQTRLRLGQYDKAVEA
ASEFRDIFGKEHYFLELMDHGNEIERRVREDLMRLAKDLQLPLLATNDLHYVAQGDAIAQ
DALLCINSGSKLHDPDRFSFDGEGYYLKSPAEMRHLWRELPDACDNTLLVADMCEVSFVE
GEGRYMPRFECPPGESEQSWFIKEIQTGLGRRFPDGIPEYAQKQADYEIDVIVGKGYPGY
FLVVADFINWAKDNGIRVGPGRGSGAGSMCAYAMGITDLDPVPHGLIFERFLNPERKSMP
DFDVDFDERRRSEVIRYVSDKYGDDRVAMIATYGTIKAKQSVKDAARVMGHPFNVGEQLT
KAMPADVMGKGVPLAKMWDKDHDRFGEGQEFRELVESEKHLGEVVDLAKGLEGLKRQWGV
HAAGVIMSSEPLIDVIPIMRRLQDGQVLTQFDYPTCETLGLVKMDFLGLRNLTILDDALI
NITANRGEDIDLDALSKDMTDKATYRLLSRGDTLGVFQLDGGGMRTLLRLMQPDNFEDIS
AALALYRPGPMGVNAHTNFALRKNGRQEVVPLDPQLKGKLQPQMEDALGPILGTTYGLCV
AGETPITDADTGERVRVDELEQRVRDGFFTFGVDGDGKVVRRRVTHWWQMPDKPVLAVHT
SSGQMLRLSGDHKVLTPRGWVPAGELVPGVDRIARPRDVQEWTHPSSVTPDEAALLGYLV
SDGYITLYENTFISSSPQLRAEVIRLSRGLFDDTHPVVDCLDRSAPRVRFAASPAGTGNG
GNQQRGGFSSIGINRWLRELGYVDKTTAAHKFVPEAVKRASVLSRTRMLAALWDGDGHVG
QKLAYYKTISHQLATDVQELLAGLGIPSRVAHADSYVSARHGIQDAWTVHVYDERFWQII
TPVMVHRSKISPRDVLTKASRSRGVGLEHMLVHAGDVVRAATAPAARASLRSGAATLPAL
RRHLWREGHVDSAKTTHPVYDGSGLYPLNETSLAYLEAMGTAEDHFDASFDWVRVEQVVT
GPPEPVYDITVDDVHNFVSTGMVLSNCIYQEQVMEIAQKLAGYTLGNADLLRRAMGKKKK
EVLDAEYVPFSEGMKANGYNEASIAALWGVLVPFSDYAFNKAHTAAYGLVSYWTAYLKAN
YPAEYMAALLTSVGDDKDKSALYLNECRRMGIKVLPPSVNESVGTFAAVGSDIRFGLHAI
RNVGRNVVDGIVSAREEKGAFTSFDDFLAKCPAPVCNKRTIESLIMGGAFDDLGHPRQGL
VMVHEEYVDAFVGVKRQEAIGQDSLWDMFGSDDDQAEAPGAGIEGMGLRPVPDVEWSKQT
KLTNEREMLGLYVSDHPLFGVEHVLQRAADTSIAALTQPDSGVKEGSHVTVAGLVTGLSV
KRTKKGDLWAIATVEDLEGAIECLFFPKTYLTVQTMLTQDIVAVVRGRVNARDDTVSLYA
EDLTIPEITDGPRGPVVLTLDYARATTGRIEEVKQVLAQHPGSTDVQIKLVQPGRSVTMS
VDASYRVEPTEALIGDLKVILGARAVSA
NT seq
4947 nt
NT seq
+upstream
nt +downstream
nt
atgtccgagctgccgcgttccgaaaacttcgtccacctgcacaaccacaccgagtactcg
atgctcgacggggctgcgcggatcaaggacatgttctcgaccgcccaggagatgggcatg
ccggcgatcgcgatgaccgaccacggctacctcttcggggcgcacgagttctggaagacg
gcgcagtcctacgacgtcaagccgatcatcgggctcgaggcctatgtcgcgcccggcacg
caccgcaccgacaagacccgcgtcaagtggggcgacgagcgcaccaacccccgtgacgac
atctccggtggtggcgcctacacgcacatgaccctgctggcgcgcaacaacaccggcatg
cacaacctcttccggatgggctcgcgggcctcgctcgactccgtcttcgccaagtggccg
cgcctggaccgcgagctgctgtcgcagtacggcgacgggctcgtcgccaccacgggctgc
ccctcgggcgagatccagacccggctgcggctgggtcagtacgacaaggccgtcgaggcg
gcctcggagttccgcgacatcttcggcaaggagcactacttcctcgagctgatggaccac
ggcaacgagatcgagcgccgggtgcgcgaggacctcatgcgcctggccaaggatctgcag
ctgccgctgctggcgaccaacgacctgcactacgtcgcccagggcgacgcgatcgcccag
gacgcgctgctgtgcatcaactccgggtccaagctgcacgacccggaccgtttttccttc
gacggtgagggctactacctcaagtcgcccgccgagatgcgtcacctgtggcgcgagctg
ccggacgcgtgcgacaacacgctcctcgtggcggacatgtgcgaggtctccttcgtcgag
ggcgaagggcggtacatgccgcgcttcgagtgccctccgggggagtcggagcagtcctgg
ttcatcaaggagatccagaccgggctcggccgccgcttccccgacggcatccccgagtac
gcgcagaagcaggccgactacgagatcgacgtcatcgtcggcaagggctaccccggctac
ttcctcgtcgtcgccgacttcatcaactgggccaaggacaacggcatccgggtcggcccc
ggccgtggctccggtgccggctcgatgtgcgcctacgccatgggcatcaccgacctcgat
cccgtgccgcacggcctgatcttcgagcgcttcctcaaccccgagcgcaagtcgatgccc
gacttcgacgtcgacttcgacgagcgccgacgctccgaggtcatccgctacgtctccgac
aagtacggcgacgaccgggtcgcgatgatcgccacctacggcacgatcaaggccaagcag
tccgtcaaggacgccgcccgcgtcatgggccaccccttcaacgtcggcgagcagctgacc
aaggcgatgcccgccgacgtgatgggcaagggtgtgccgctggccaagatgtgggacaag
gaccacgaccgcttcggcgaggggcaggagttccgcgagctcgtcgagtcggagaagcac
ctgggtgaggtcgtcgacctggccaagggcctcgagggcctcaagcgccagtggggcgtg
cacgccgccggcgtcatcatgtccagcgagccgctgatcgacgtcatcccgatcatgcgc
cgcctgcaggacgggcaggtcctcacgcagttcgactacccgacctgcgagacgctcggc
ctggtcaagatggacttcttgggtctgcgcaacctcacgatcctcgacgacgccctgatc
aacatcacggccaaccgcggcgaggacatcgacctcgacgccctgagcaaggacatgacc
gacaaggcgacctaccgcctgctctcgcgcggtgacacgctcggcgtcttccagctcgac
ggtggcggcatgcgcaccctgctgcggctgatgcagccggacaacttcgaggacatctcc
gccgccctcgcgctctaccgacccggcccgatgggtgtcaacgcgcacaccaacttcgcc
ctgcgcaagaacggccgccaggaggtcgtgccgctcgacccgcagctgaagggcaagctc
cagccgcagatggaggacgcgctcgggccgatcctgggcaccacctacgggttgtgcgtc
gcgggcgagacgccgatcaccgacgctgacaccggcgagcgggtccgcgtggacgagctc
gagcagcgtgtccgtgacggcttcttcaccttcggggtggacggcgacggcaaggtcgtg
cggcgtcgcgtcacccattggtggcagatgccggacaagcccgtcctcgctgtccacacg
tcctcaggacagatgctgcggctgtcaggtgatcacaaggtcctgactccccggggctgg
gtcccggcgggcgagctcgtgccgggtgtcgaccggatcgcccggccgcgagacgtgcag
gagtggacgcatccgtcgtcggtgacgccggatgaagcggcgctgctcgggtatctcgtg
tccgacgggtacatcaccctctacgaaaacacgttcatcagctccagcccgcagctgcgt
gcagaggtcatccgtctctcccgcgggctcttcgacgacacccacccggtcgtcgactgc
ctcgatcgctccgcgccccgggtgcgcttcgcggcatcacctgcgggcacgggcaacggc
ggcaaccagcaacgcggcggcttctcctccatcgggatcaaccgatggctgcgcgagctc
ggttacgtcgacaagacgacggctgctcacaagttcgtccctgaggccgtcaagcgagcg
agtgtcctgtcgcgcacccggatgctggctgccctctgggacggggacggccacgtcggc
cagaagctggcctactacaagacgatcagccaccagctggccacggacgtccaggagctg
ctcgccggcctcggcatcccgtcccgtgtcgcgcatgccgacagctatgtgtcggcccgc
cacggcatccaggacgcgtggacggtgcacgtctacgacgagcgcttctggcagatcatc
acgcccgtcatggtccaccggagcaagatctccccgcgagatgtgctgacgaaggcgtcc
cgcagccggggagtcgggctggagcacatgctcgtccacgccggggacgtcgttcgggcc
gccacggcgccggcagcccgcgccagcctgcggtcaggggcagccacccttcccgccctg
cgacgccacctctggcgtgagggacacgtcgactccgccaagacgacccatcccgtgtac
gacggttctggcctctacccgctcaacgagacctcgctggcctacctcgaggccatggga
acggcggaggaccacttcgacgcatccttcgactgggtgcgcgtcgagcaggtggtgact
ggtccgcccgagccggtgtacgacatcaccgtcgacgacgtccacaacttcgtgtccacc
ggcatggtgctctccaactgcatctaccaggagcaggtcatggagatcgcgcagaagctg
gcgggctacacgctcggcaatgctgatctgctgcgtcgtgccatgggcaagaagaagaag
gaggtcctcgacgccgagtacgtccccttctccgaggggatgaaggccaatggctacaac
gaggcctccatcgccgcgctgtggggcgtgctcgtccccttctccgactacgccttcaac
aaggcgcacaccgccgcctacggtctcgtctcgtactggacggcctacctcaaggccaac
tacccggccgagtacatggcggcgctgctgacctcggtcggcgacgacaaggacaagtcg
gcgctctacctcaacgagtgccgccgcatgggcatcaaggtgctgccgccatcggtcaac
gagtcggtcgggaccttcgccgccgtcggcagcgacatccgcttcggcctgcacgcgatc
cgcaacgtcggccgcaacgtcgtcgacgggatcgtctccgcgcgcgaggagaagggagcc
ttcacctccttcgacgacttcctcgccaagtgcccggcacccgtgtgcaacaagcgcacc
atcgagtcgctcatcatgggcggagccttcgacgacctcgggcacccgcgccagggcctg
gtcatggtccacgaggagtacgtcgacgccttcgtcggggtcaagcgccaggaggccatc
ggccaggactcgctgtgggacatgttcggcagcgacgacgaccaggccgaggcgcccggt
gccggcatcgaggggatggggctgcggccggtcccggacgtcgagtggagcaagcagacc
aagctgaccaacgagcgcgagatgctcggcctctacgtctccgaccacccgctcttcggc
gtcgagcacgtgctgcagcgcgccgccgacacctcgatcgcggcgctcacccagcccgac
tccggggtcaaggagggcagccacgtcacggtcgccggcctcgtcacgggtctgagcgtc
aagcgcaccaagaagggcgacctctgggcgatcgcgaccgtcgaggacctcgagggcgcg
atcgagtgcctcttcttccccaagacctacctgacggtgcagacgatgctcacccaggac
atcgtcgccgtcgtgcgtggccgggtcaatgcgcgcgacgacacggtctcgctgtatgcg
gaggacctgacgatccccgagatcaccgacggtccccgcgggcccgtcgtgctcaccctc
gactacgcccgggcgacgaccgggcgcatcgaagaggtcaagcaggtgctcgcccagcac
cccggcagcactgacgtgcagatcaagctcgtccaacccggccgctcggtgacgatgtcc
gtcgacgcgagctatcgggtcgaacccaccgaggcgctgatcggcgacctcaaggtcatc
ctcggagcacgggcggtatcagcatga
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