KEGG   Janibacter limosus: EXU32_13445
Entry
EXU32_13445       CDS       T05853                                 
Name
(GenBank) DEAD/DEAH box helicase
  KO
K10843  DNA excision repair protein ERCC-3 [EC:5.6.2.4]
Organism
jli  Janibacter limosus
Pathway
jli03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:jli00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    EXU32_13445
  09124 Replication and repair
   03420 Nucleotide excision repair
    EXU32_13445
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:jli03021]
    EXU32_13445
   03400 DNA repair and recombination proteins [BR:jli03400]
    EXU32_13445
Enzymes [BR:jli01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     EXU32_13445
Transcription machinery [BR:jli03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIH
     EXU32_13445
DNA repair and recombination proteins [BR:jli03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TFIIH complex
     EXU32_13445
SSDB
Motif
Pfam: ERCC3_RAD25_C Helicase_C_3 ResIII Helicase_C DEAD SNF2-rel_dom
Other DBs
NCBI-ProteinID: QBF47163
UniProt: A0A4P6MZJ0
LinkDB
Position
2814930..2816564
AA seq 544 aa
MALDGALIVQSDKTLLLEVDHERSADARRAIAPFAELERAPEHIHTYRVTPLGLWNARAA
GHDAEQVVNALLTHSRYPVPQALLVDIAETMDRYGRLVLEKDGDQLVLRTTDRAVLTEVM
RHKKIMPLLGEMLSPDEVVVHPSERGTLKQELLKVGWPAEDRAGYVDGEAHPIALLEDGW
SLRPYQQQAVDGFWDGGSGVVVLPCGAGKTLVGAGAMAAAKATTLILVTNTVSARQWKQE
LLERTTLTEEEIGEYSGARKEIRPVTIATYQVLTLRRKGIYPHLDLLDARDWGLVVYDEV
HLLPAPIFRMTADLQARRRLGLTATLVREDGREADVFSLIGPKRFDAPWKDIEAQGYIAP
ADCVEVRVSLTDSERMAYATAEAEDRYRLASCSPVKLGVVRTIVDQHRGQPTLVIGQYLD
QLHELAEQLDADLITGETPVKQRQELFADFREGRSNLLVVSKVANFSVDLPEASVAIQVS
GTFGSRQEEAQRLGRVLRPKEDGRTAHFYTVVTRDTVDAEFAAHRQRFLAEQGYAYRILD
ADDL
NT seq 1635 nt   +upstreamnt  +downstreamnt
gtggccctcgacggcgcgctcatcgtccagagcgacaagaccctcctgctcgaggtcgac
cacgagcgctcggccgacgcgcggcgggccatcgcccccttcgccgagctggagcgggcc
ccggagcacatccacacctaccgcgtgaccccgctcgggctgtggaacgcccgcgccgcg
ggccacgacgccgagcaggtcgtcaatgccctgctcacccactcgcgctaccccgtgccc
caggccctgctcgtcgacatcgccgagacgatggaccgctacggccggctcgtcctggag
aaggacggcgaccaactcgtcctgcgcaccaccgaccgcgcggtgctcaccgaggtcatg
cgccacaagaagatcatgccgctgctcggcgagatgctctcccccgacgaggtcgtcgtg
cacccctcggagcgcggcaccctcaagcaggaactgctcaaggtgggctggcccgcggag
gaccgcgccggttacgtggacggcgaggcgcaccccatcgcgctgctcgaggacggctgg
tccctgcggccctaccagcagcaggcggtcgacgggttctgggacggtggctcgggcgtc
gtcgtcctgccctgcggggcgggcaagacgctggtcggcgcgggcgcgatggcggctgcc
aaggcgaccaccctcatcctcgtgaccaacacggtgagcgcccggcagtggaagcaggag
ctgctcgagcgcaccacgctgaccgaggaggagatcggcgagtactccggtgcccgcaag
gagatccggccggtcaccatcgcgacctaccaggtcctcacgctccggcggaaggggatc
taccctcacctcgacctgctcgacgcccgcgactggggcctggtcgtctacgacgaggtc
cacctgctgccggctccgatcttccggatgacggccgacctgcaggcccgccgtcgcctc
ggcctgacggcgaccctcgtgcgtgaggacggccgcgaggccgatgtcttctcgctcatc
gggcccaagcgcttcgacgcgccgtggaaggacatcgaggcgcagggctacatcgcgccc
gcggactgcgtcgaggtccgggtgagcctgaccgactccgagcggatggcctatgccacc
gccgaggcggaggaccgctaccggctcgcctcctgctccccggtcaagctcggggtcgtg
cgcacgatcgtcgatcagcaccggggccagcccacgctcgtcataggccagtacctcgac
cagctgcacgagctcgccgagcagctcgacgccgatctcatcacgggcgagacccccgtc
aagcagcggcaagagctcttcgccgacttccgcgaagggaggtccaacctcctcgtcgtg
tccaaggtggccaacttctccgtcgacctccccgaggcgagcgtcgcgatccaggtcagc
ggcaccttcggctcacgccaggaggaggcccagcgcctgggccgggtgctgcggcccaag
gaggacgggcgcaccgcgcacttctacaccgtcgtcacacgcgacaccgtcgacgcggag
ttcgccgcccaccggcagcgcttcctcgccgagcagggttacgcctaccggatcctcgac
gccgacgacctctga

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