Entry |
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Name |
(GenBank) DEAD/DEAH box helicase
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KO |
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Organism |
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Pathway |
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Brite |
KEGG Orthology (KO) [BR:jli00001]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
EXU32_13445
09124 Replication and repair
03420 Nucleotide excision repair
EXU32_13445
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:jli03021]
EXU32_13445
03400 DNA repair and recombination proteins [BR:jli03400]
EXU32_13445
Enzymes [BR:jli01000]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
EXU32_13445
Transcription machinery [BR:jli03021]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
EXU32_13445
DNA repair and recombination proteins [BR:jli03400]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
EXU32_13445
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SSDB |
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Motif |
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Other DBs |
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LinkDB |
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Position |
2814930..2816564
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AA seq |
544 aa
MALDGALIVQSDKTLLLEVDHERSADARRAIAPFAELERAPEHIHTYRVTPLGLWNARAA
GHDAEQVVNALLTHSRYPVPQALLVDIAETMDRYGRLVLEKDGDQLVLRTTDRAVLTEVM
RHKKIMPLLGEMLSPDEVVVHPSERGTLKQELLKVGWPAEDRAGYVDGEAHPIALLEDGW
SLRPYQQQAVDGFWDGGSGVVVLPCGAGKTLVGAGAMAAAKATTLILVTNTVSARQWKQE
LLERTTLTEEEIGEYSGARKEIRPVTIATYQVLTLRRKGIYPHLDLLDARDWGLVVYDEV
HLLPAPIFRMTADLQARRRLGLTATLVREDGREADVFSLIGPKRFDAPWKDIEAQGYIAP
ADCVEVRVSLTDSERMAYATAEAEDRYRLASCSPVKLGVVRTIVDQHRGQPTLVIGQYLD
QLHELAEQLDADLITGETPVKQRQELFADFREGRSNLLVVSKVANFSVDLPEASVAIQVS
GTFGSRQEEAQRLGRVLRPKEDGRTAHFYTVVTRDTVDAEFAAHRQRFLAEQGYAYRILD
ADDL |
NT seq |
1635 nt +upstreamnt +downstreamnt
gtggccctcgacggcgcgctcatcgtccagagcgacaagaccctcctgctcgaggtcgac
cacgagcgctcggccgacgcgcggcgggccatcgcccccttcgccgagctggagcgggcc
ccggagcacatccacacctaccgcgtgaccccgctcgggctgtggaacgcccgcgccgcg
ggccacgacgccgagcaggtcgtcaatgccctgctcacccactcgcgctaccccgtgccc
caggccctgctcgtcgacatcgccgagacgatggaccgctacggccggctcgtcctggag
aaggacggcgaccaactcgtcctgcgcaccaccgaccgcgcggtgctcaccgaggtcatg
cgccacaagaagatcatgccgctgctcggcgagatgctctcccccgacgaggtcgtcgtg
cacccctcggagcgcggcaccctcaagcaggaactgctcaaggtgggctggcccgcggag
gaccgcgccggttacgtggacggcgaggcgcaccccatcgcgctgctcgaggacggctgg
tccctgcggccctaccagcagcaggcggtcgacgggttctgggacggtggctcgggcgtc
gtcgtcctgccctgcggggcgggcaagacgctggtcggcgcgggcgcgatggcggctgcc
aaggcgaccaccctcatcctcgtgaccaacacggtgagcgcccggcagtggaagcaggag
ctgctcgagcgcaccacgctgaccgaggaggagatcggcgagtactccggtgcccgcaag
gagatccggccggtcaccatcgcgacctaccaggtcctcacgctccggcggaaggggatc
taccctcacctcgacctgctcgacgcccgcgactggggcctggtcgtctacgacgaggtc
cacctgctgccggctccgatcttccggatgacggccgacctgcaggcccgccgtcgcctc
ggcctgacggcgaccctcgtgcgtgaggacggccgcgaggccgatgtcttctcgctcatc
gggcccaagcgcttcgacgcgccgtggaaggacatcgaggcgcagggctacatcgcgccc
gcggactgcgtcgaggtccgggtgagcctgaccgactccgagcggatggcctatgccacc
gccgaggcggaggaccgctaccggctcgcctcctgctccccggtcaagctcggggtcgtg
cgcacgatcgtcgatcagcaccggggccagcccacgctcgtcataggccagtacctcgac
cagctgcacgagctcgccgagcagctcgacgccgatctcatcacgggcgagacccccgtc
aagcagcggcaagagctcttcgccgacttccgcgaagggaggtccaacctcctcgtcgtg
tccaaggtggccaacttctccgtcgacctccccgaggcgagcgtcgcgatccaggtcagc
ggcaccttcggctcacgccaggaggaggcccagcgcctgggccgggtgctgcggcccaag
gaggacgggcgcaccgcgcacttctacaccgtcgtcacacgcgacaccgtcgacgcggag
ttcgccgcccaccggcagcgcttcctcgccgagcagggttacgcctaccggatcctcgac
gccgacgacctctga |