Janibacter limosus: EXU32_13895
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Entry
EXU32_13895 CDS
T05853
Name
(GenBank) RNA degradosome polyphosphate kinase
KO
K00937
polyphosphate kinase [EC:
2.7.4.1
]
Organism
jli
Janibacter limosus
Pathway
jli00190
Oxidative phosphorylation
jli03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
jli00001
]
09100 Metabolism
09102 Energy metabolism
00190 Oxidative phosphorylation
EXU32_13895
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
EXU32_13895
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
jli03019
]
EXU32_13895
Enzymes [BR:
jli01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.4 Phosphotransferases with a phosphate group as acceptor
2.7.4.1 ATP-polyphosphate phosphotransferase
EXU32_13895
Messenger RNA biogenesis [BR:
jli03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
EXU32_13895
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PP_kinase_C_1
PP_kinase
PP_kinase_C
PP_kinase_N
PLDc_2
Motif
Other DBs
NCBI-ProteinID:
QBF47247
UniProt:
A0A4P6MYL6
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All DBs
Position
2898487..2900757
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AA seq
756 aa
AA seq
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MVDADAAHAFPAPQAGTVTGDVSISSSSPAAASELRARAANGRFVRTAHHDGADPSALPS
DRFLDREISWLQFNERVLQLAADSSVPLLERARFLSIFSSNLDEFFMVRAAGLKRRIATG
IAVRSPSGLEPREVLEQISRVAHELSAMQTRIFDDSVRPALVDEGISIVRWSEVEAPEQE
RLGDLFSHEIYPVLTPLAVDPAHPFPYISGLSLNLAVILINPKTGKEHFARIKMPPSLPR
FLKVRRASASVTEDLFEAQFVPLEDVIAAHLDQLFPGMEVHEHYSFRVTRNEDLEVEEDD
AENLLAALEKELTRRRFGPPVRLEVEEDLDDHVMELLTRELGVTEDEVYRLPAPLDLRGL
DEIADIDRTDLHFPPFVARTNPDLAPEESSKAANLIERIAHQDVLLQHPYDSFSTSVQAF
LEQAAADPQVLAIKQTLYRTSGDSPIVDALIDAAEAGKQVLAVVEIKARFDEQNNIEWAR
KLEHAGVHVVYGIVGLKTHCKLALVVRQEPDGLARYCHVGTGNYNPKTARLYEDVGLLTS
DPVVGQDLTRLFNQLSGLAPRSKFKRLLVAPRSIRDGLLDRIDKQIHRQVQHGDGRIAFK
VNSLVDEATIDALYRASIAGVRVDIWVRGICALRPGVEGLSDNIRVHCVLGRFLEHSRIF
LFGTGDGREAWFGSADLMHRNLDRRVEAMVRIVEPRHVEQLFDLVARGMSGDYGHWSLDG
AGRWTRVHQAPDGTPLPDIQEALIAMHAQRRRKARR
NT seq
2271 nt
NT seq
+upstream
nt +downstream
nt
atggtggacgccgacgccgcacatgccttccccgccccgcaggccgggacggtcaccggc
gacgtctccatctcctcctcgtcgcccgccgcagccagcgagctgcgcgcccgagcggcc
aacggccgcttcgtccgcacggcccatcacgacggggccgacccgtccgccctgccgagc
gaccgcttcctcgaccgggagatcagctggctgcagttcaacgagcgcgtcctgcagctg
gccgccgactcgtccgtgccgctgctcgagcgggcgcgcttcctgtcgatcttctccagc
aacctcgacgagttcttcatggtccgcgccgccgggctcaagcggcgcatcgcgacgggc
atcgccgtgcgcagcccctccgggctggagccgcgcgaggtcctcgagcagatctcgcgg
gtggcccacgagctgtcggccatgcagacccgcatcttcgacgacagcgtgcggcccgcg
ctcgtggacgaggggatcagcatcgtgcgctggagcgaggtcgaggcacccgagcaggag
cgcctcggcgacctcttcagccacgagatctacccggtgctcactcccctggccgtcgac
ccggcccaccccttcccctacatctccgggctgtccctcaacctcgcggtgatcctgatc
aaccccaagacgggcaaggagcacttcgcgcggatcaagatgccgccctcgctcccgcgc
ttcctcaaggtgcgtcgagcctccgcgtcggtcaccgaggacctcttcgaggcccagttc
gtcccgctcgaggacgtcatcgccgcgcacctcgaccagctcttccccggcatggaggtg
cacgagcactactccttccgggtcacccgcaacgaggacctcgaggtcgaggaggacgac
gcggagaacctcctggcggccctggagaaggagctgacccggcgccgcttcggcccaccg
gtccgcctcgaggtcgaggaggacctcgacgaccacgtcatggagctgctcacccgggag
ctgggcgtcaccgaggacgaggtctaccggctgcccgcaccgctggacctgcgaggtctc
gacgagatcgccgacatcgaccggaccgacctgcacttcccccccttcgtcgcccgcacc
aaccccgacctcgccccggaggagtcctccaaggccgccaacctcatcgagcggatcgcc
caccaggacgtgctcctgcagcacccctacgactccttctccacctcggtgcaggccttc
ctcgagcaggccgccgccgacccgcaggtcctcgcgatcaagcagacgctctaccgcacc
agcggtgacagcccgatcgtcgacgcgctcatcgatgcggccgaggccggcaagcaggtg
ctcgcggtcgtcgagatcaaggcgcgcttcgacgagcagaacaacatcgagtgggcccgc
aagctcgagcacgccggcgtccacgtcgtctacgggatcgtcgggctgaagacccactgc
aagctcgcgctggtggtccggcaggagccggacgggctggcgcgctactgccacgtcggg
accggcaactacaaccccaagacggcacggctctacgaggacgtggggctgctgacatcc
gacccggtggtcggccaggacctcacccgcctcttcaaccagctctccggcctggcgccg
cgcagcaagttcaagcggctcctcgtcgcgccccgcagcatccgggacgggctgctcgac
cggatcgacaagcagatccaccggcaggtccagcacggtgacggacgcatcgccttcaag
gtcaactccctcgtcgacgaggccacgatcgacgcgctgtaccgggccagcatcgctggg
gtccgggtcgacatctgggtgcgcggcatctgcgccctgcgccccggcgtcgaggggctc
agcgacaacatccgggtccactgcgtgctcgggcgcttcctggagcactcgaggatcttc
ctcttcgggaccggcgacggccgcgaggcgtggttcggctcggccgacctcatgcaccgc
aacctcgaccggcgggtcgaggccatggtccgcatcgtcgagccgcgccacgtcgagcag
ctcttcgacctcgtcgcccgcgggatgtccggcgactacggccactggtcgctcgacggc
gccggtcggtggacccgggtccaccaggcccccgacggcacgcccctgcccgacatccag
gaagccctgatcgcgatgcacgcccagcggcgtcgcaaggcgcggcgttga
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