Janibacter limosus: EXU32_15550
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Entry
EXU32_15550 CDS
T05853
Name
(GenBank) CCA tRNA nucleotidyltransferase
KO
K00970
poly(A) polymerase [EC:
2.7.7.19
]
Organism
jli
Janibacter limosus
Pathway
jli03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
jli00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
EXU32_15550
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
jli03019
]
EXU32_15550
Enzymes [BR:
jli01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
EXU32_15550
Messenger RNA biogenesis [BR:
jli03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
EXU32_15550
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PolyA_pol
PolyA_pol_RNAbd
HD
tRNA_NucTran2_2
AbiEii
DUF1707
Motif
Other DBs
NCBI-ProteinID:
QBF47540
UniProt:
A0A4P6MZR6
LinkDB
All DBs
Position
3234916..3236382
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AA seq
488 aa
AA seq
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MSSPALPPEILRAAVAHLAPLLPVLTELGDRFAAGGHELALVGGPVRDAFLARTSGDLDF
TTSASPEETEAILADWGDAHWDMGREFGTIGARKGADTVEVTTYRADAYDGTTRKPVVAF
GDNLQDDLVRRDFTVNAMALRLPDLDLVDPYGGVIDLAARRLRTPSAPEVSFSDDPLRMM
RAARFVAQLGLVPAPEVLTAMTEAAGTLQIVSAERIRDELVKLVLGEDPVAGLRVLVDTG
LADQMLPELPALRLEIDEHHRHKDVYEHSLTVLEQAIDLEGVPGPGSDEQDHPVPRPDLV
LRLAALLHDIGKPRTRRFEDKGGVSFHHHDVVGAKLAAKRLKALRFDKATTQSVARLVEL
HLRFHGYGDGQWSDSAVRRYVTDAGPHLQRLHRLTRADCTTRNQRKATRLRRAYDDLEVR
IDELLEQEELGKVRPDLDGNEIAEVLGIAPGPVLGEAYRHLLQVRLDEGPLDKQEAARRL
RTWWAARD
NT seq
1467 nt
NT seq
+upstream
nt +downstream
nt
atgtcctcccccgctctgcctcccgagatcctgcgtgctgcggtggcccacctggcgccg
ttgctcccggtgctcaccgagctcggcgaccggttcgccgcgggtgggcacgagctggca
ctggtggggggtccggtccgggacgccttcctggcccgcacgagcggtgacctggacttc
acgacctccgcatcccccgaggagacggaggcgatcctcgcggactggggcgacgcccac
tgggacatgggccgcgagttcggcacgatcggtgcgcgcaagggagcggacacggtcgag
gtgacgacctaccgggccgacgcctacgacggcacgacccgcaagccggtcgtggccttc
ggcgacaacctgcaggacgacctcgtgcggcgcgacttcaccgtcaacgccatggccctg
cgcctgcccgacctcgacctggtcgacccgtacgggggcgtcatcgacctcgcggcgcgg
cggttgcgcacgccgtcggctcccgaggtctccttcagcgacgacccgctgcggatgatg
cgggctgcccgcttcgtcgcccagctgggcctggtgcccgcacccgaggtcctcacggcg
atgaccgaggctgccggcaccctgcagatcgtctcggcggagcgcatccgcgacgagctg
gtcaagctcgtcctcggcgaggacccggtcgctggcctgagggtcctcgtggacaccggt
ctggccgaccagatgctgccggagctgcccgcccttcgcctggagatcgacgagcaccac
cgccacaaggacgtctacgagcactcgctgacggtgctggagcaggccatcgacctcgag
ggtgtccccggaccggggtccgacgagcaggaccacccggtcccgcgacccgacctggtc
ctgcggctggccgcgctgctccacgacatcggcaagccacgcacccgtcgcttcgaggac
aaggggggtgtctccttccaccaccacgacgtcgtcggcgccaagctggcggccaagcgc
ctgaaggcactgcgcttcgacaaggcgacgacgcagtcggtggcccggctcgtcgagctg
cacctgcgcttccacgggtacggcgacgggcagtggagcgactcggccgtccgccgttat
gtcaccgacgccggcccgcacctgcagcgcctgcaccgactcacccgggcggactgcacg
acccgcaaccagcgcaaggccacccggctgcggcgcgcgtacgacgacctcgaggtccgc
atcgacgagctgctcgagcaggaggagctgggcaaggtccggcccgacctcgacggcaac
gagatcgccgaggtcctcggcatcgcccccggacccgtcctcggtgaggcctaccgtcac
ctgctgcaggtccgtctcgacgaaggcccgctcgacaagcaggaggctgcgcggcggttg
cgcacgtggtgggccgctcgcgactga
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