Janthinobacterium lividum: G3257_05295
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Entry
G3257_05295 CDS
T06723
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
jlv
Janthinobacterium lividum
Pathway
jlv03030
DNA replication
jlv03410
Base excision repair
jlv03420
Nucleotide excision repair
jlv03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
jlv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
G3257_05295 (polA)
03410 Base excision repair
G3257_05295 (polA)
03420 Nucleotide excision repair
G3257_05295 (polA)
03440 Homologous recombination
G3257_05295 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
jlv03032
]
G3257_05295 (polA)
03400 DNA repair and recombination proteins [BR:
jlv03400
]
G3257_05295 (polA)
Enzymes [BR:
jlv01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
G3257_05295 (polA)
DNA replication proteins [BR:
jlv03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
G3257_05295 (polA)
DNA repair and recombination proteins [BR:
jlv03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
G3257_05295 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
G3257_05295 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
DUF2167
Motif
Other DBs
NCBI-ProteinID:
QKY01733
LinkDB
All DBs
Position
1193467..1196229
Genome browser
AA seq
920 aa
AA seq
DB search
MQNTLLLVDGSSYLYRAFHALPDLRSPDGYPTGAMHGMVNMLRRLRADYPAAYIACVFDA
KGKTFRDDMYPEYKATRASMPDDLRLQIEPIHEAVRAMGWPILMVDGVEADDVIGTLAVQ
AAAAGMNVVVSTGDKDLAQLVNSQVTLINTMSNEKLDEAAVLVKFGVPPNRIIDYLSLIG
DTVDNVPGVSKCGPKTAVKWLTLYDSLEGVMENAAKVGGAVGENLRTALPWLPQARALIT
VKTDCDLSEHMTTIADSLVAKHEDKEALLAFFQRYGFKALLRELGAVPPPMSPVGAPATA
GAAAANTTGDMFADAAPAVEAEYETVLTDEQLDKWIALIDAAPLTAVDTETTSLEPMTAQ
MVGISLSVAEHAACYIPLAHDYAGAPEQLTREHVLAKLRPWLEDANKPKLGQNLKYDSHI
FANHGVTLRGIAHDTLLESYVFESHKKHDMDSLALRHLNYTTIPFEDVCGKGAKQITFNQ
VEVEQAAKYAAEDADVTLRLHNAMWGNVANDDKLTFIYEKIEMPTAVVLQKIERNGVLID
DELLNIQSAELAVKILELERKAYELAEQPFNLGSPKQIGEIFFEKLKLPVVKKTPTGAPS
TDEEVLQKLAEDYPLPKVLLEYRGMAKLKSTYTDKLPKMINVTTGRVHTNYAQAVAVTGR
LASNDPNLQNIPIRSAEGRRIREAFIAPPGSHIVSADYSQIELRIMAHISGDEAMLRAFA
DGIDIHRATAAEIFGVPAAEVQSEQRRYAKVINFGLIYGMSAFGLAGNLGVDRTAAQSYI
DRYFARFSGVKQYMEDTRQQAKARGYVETVFGRRLWLPEINSPNGPRRQGAERAAINAPM
QGTAADLIKLAMIAVQGWLETDNLQTKMIMQVHDELVLEVPDAELELVKRKLPELMAGVA
ALKVPLTAEVGVGRNWDEAH
NT seq
2763 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaacaccctgctgttagtcgacggttccagttacctttatcgtgccttccatgcg
ctgcccgacctgcgcagcccggatggctatcccacgggcgccatgcacggcatggtcaac
atgctgcgccgcctgcgcgccgattacccggccgcctacatcgcctgcgtgttcgatgcc
aaaggtaaaacgttccgtgacgacatgtatcccgaatacaaggccacgcgcgcctcgatg
ccggacgacctgcgcctgcagatcgagccgatccacgaagccgtgcgcgccatgggctgg
ccgatcctgatggtcgacggcgtggaggcggacgatgtgatcggcacgctggccgtgcag
gccgccgccgccggcatgaacgtggtggtgtcgactggcgacaaggacctggcgcagctg
gtcaacagccaggtgaccctgatcaataccatgagcaatgaaaagctcgatgaagcggcc
gtgctggtcaagttcggcgtgccgccgaaccgcatcatcgattatctgtcgctgatcggc
gataccgtggacaacgtgccgggcgtgtcgaaatgcggcccgaagacggccgtcaaatgg
ctgaccttgtacgacagcctggaaggcgtgatggaaaacgcggccaaggtgggcggcgcc
gtgggggaaaacctgcgcacggccttgccatggctgccgcaggcgcgcgccttgatcacc
gtcaagactgattgcgacttgtccgaacacatgacgaccatcgccgactcgctggtggcg
aaacacgaagacaaggaagcgctgctggccttcttccagcgctacggcttcaaggccctg
ctgcgcgaactgggcgcggtgccgccgccgatgtcgcctgttggcgcaccggcaactgcc
ggtgccgctgctgccaacacgacgggcgacatgtttgccgatgccgcgccagcagtcgag
gccgaatatgaaaccgtgctgacggacgagcagctggacaaatggattgccctgatcgat
gcggccccgctgacggctgttgacacggaaaccacctcgctggagccgatgacggcgcaa
atggtcggcatttccctctccgtggccgagcacgccgcctgctacattcccctggcccac
gactacgcgggcgcgcccgagcaattaacgcgtgaacacgtgctggcgaaattgcgcccg
tggctggaagatgcgaacaagcccaagctgggccagaacctgaagtatgacagccacatc
ttcgccaaccacggcgtgacgttgcgcggcatcgcccacgataccctgctcgaatcgtat
gtgtttgaatcgcacaagaagcacgacatggacagcctggccctgcgccacctgaactac
acgacgatcccgttcgaggacgtgtgcggcaagggcgccaagcagatcacgttcaatcaa
gtcgaggtagagcaggcggcgaaatatgcggccgaggatgcggacgtcaccttgcgcttg
cacaatgccatgtggggcaacgtggcgaatgatgacaagctgaccttcatctatgaaaag
atcgagatgccgacggccgtggtcttgcaaaagatcgagcgcaacggcgtgctgatcgat
gatgagctgctcaacatccagtcggccgagctggccgtgaaaattctcgaactggaaagg
aaggcgtatgaactggccgagcagccattcaacctgggttcgcccaagcagatcggcgaa
atcttctttgagaaattgaaactgccggtggtcaagaaaactccgacgggcgcgccatcg
acggatgaagaagtgctgcaaaagctggccgaggattatccgctgcccaaagtgctgctc
gaataccgcggcatggccaagctgaagtcgacgtacacggataaattgccgaagatgatc
aacgtcaccacgggccgcgtgcatacgaactatgcgcaagccgtggccgtcacgggacgg
ttggcgtcgaacgacccgaacttgcagaatatccccatccgcagcgcggaaggccggcgc
atccgcgaagcctttattgcgccgcccggcagccacatcgtctcggccgactattcgcag
atcgaattgcgcatcatggcgcatatctcgggcgatgaagccatgctgcgcgcgtttgcc
gacggcatcgacattcaccgcgccacggccgctgaaatcttcggcgtgccggccgcggaa
gtacaaagcgagcagcgccgctacgccaaggtcatcaactttggtttgatctacggcatg
agcgcgtttggcctggccggtaacctgggcgtggaccgcacggccgcgcaaagctatatc
gaccgctactttgcccgcttctccggcgtgaaacagtatatggaagacacgcgccagcaa
gccaaggcgcgcggctacgtggaaaccgtgttcggccgccgtttgtggttgccggaaatc
aattcgccgaacggcccccgccgccagggcgcggaacgggcggcgatcaacgcgccgatg
cagggcacggccgccgacctgatcaagctggccatgatcgccgtgcaaggctggctggaa
acggacaacttgcagacgaagatgatcatgcaagtgcacgatgaactggtgctggaagtg
ccggacgcggagctcgaattggtcaagcgcaagctgccggaactgatggcgggcgtggcc
gcgctgaaagtgccgctgacggcggaagtgggcgtaggacgcaactgggacgaagcgcat
tga
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