Janthinobacterium lividum: G3257_09075
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Entry
G3257_09075 CDS
T06723
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
jlv
Janthinobacterium lividum
Pathway
jlv00260
Glycine, serine and threonine metabolism
jlv00460
Cyanoamino acid metabolism
jlv00630
Glyoxylate and dicarboxylate metabolism
jlv00670
One carbon pool by folate
jlv00680
Methane metabolism
jlv01100
Metabolic pathways
jlv01110
Biosynthesis of secondary metabolites
jlv01120
Microbial metabolism in diverse environments
jlv01200
Carbon metabolism
jlv01230
Biosynthesis of amino acids
jlv01240
Biosynthesis of cofactors
jlv04981
Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:
jlv00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
G3257_09075
09102 Energy metabolism
00680 Methane metabolism
G3257_09075
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
G3257_09075
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
G3257_09075
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
G3257_09075
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
G3257_09075
Enzymes [BR:
jlv01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
G3257_09075
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Gene cluster
GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
Aminotran_5
Cys_Met_Meta_PP
Motif
Other DBs
NCBI-ProteinID:
QKY02385
LinkDB
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Position
2020699..2021946
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AA seq
415 aa
AA seq
DB search
MFAKDHNLANVDPELFAVIQKENTRQHDHIELIASENYTSPAVMEAQGSQLTNKYAEGYP
GKRYYGGCEYVDVAEQLAIDRVKQLFGAECANVQPNSGSQANQGVFFAMLKPGDLIMGMS
LAEGGHLTHGMPLNMSGKWFDVVSYGLTAEEDIDYEAMERLARERKPKLIIAGASAFSKK
IDFERFSKIAKEVGAYFMVDMAHYAGLIAAGLYPNPVPFADFVTSTTHKSLRGPRGGIIL
MKAEHEKAINSAIFPGIQGGPLMHVIAGKAVAFKEALSPEFVEYQKQVIKNADVLAKTLI
KRGLRIVSGGTESHVMLVDLRAKNLTGKEAEAILGSAHITCNKNGIPNDPQKPFVTSGIR
LGSPAMTTRGFKEAQAEEVGNLIADVLDNPHDAATIERVKAAVKVLADAHPVYAP
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
atgtttgcaaaagatcacaacctcgccaacgtcgatcctgaattgttcgccgtcatccaa
aaagagaatacgcgccagcacgaccacatcgaactgatcgcgtcggagaactacacgtcg
ccagccgtaatggaagcgcaaggctcgcagctgacgaataaatatgcggaaggctaccca
ggcaagcgctactacggtggctgcgaatacgtcgacgtggccgagcaactggccatcgac
cgcgtgaaacagctgttcggcgccgaatgcgcgaacgtgcagccgaattccggctcgcag
gcgaaccagggcgtgttcttcgccatgctgaaaccaggcgacctgatcatgggtatgtcg
ctggccgaaggcggccacctgacccacggcatgccgctgaacatgtccggcaaatggttt
gacgtcgtctcctacggtttgacggcggaagaagacatcgactacgaggcaatggagcgc
ctggcccgcgaacgcaagccgaaactgattatcgctggcgcgtccgcgttctcgaaaaag
atcgacttcgaacgcttcagcaagatcgccaaggaagttggcgcgtatttcatggtcgac
atggcccactacgccggcctgatcgccgccggcctgtacccgaacccggtgccgttcgcc
gacttcgtcacctcgaccacgcacaaatccctgcgcggcccgcgcggcggcatcatcctg
atgaaggccgaacacgaaaaagccatcaactcggccatcttccctggcatccagggcggc
ccgctgatgcacgtgatcgccggcaaggccgtcgccttcaaggaagcgctgagccctgaa
ttcgtcgaataccagaagcaagtgatcaagaacgccgacgtgctggcgaaaaccctgatc
aagcgcggcctgcgcatcgtgtccggcggcaccgaatcgcatgtcatgctggtcgacctg
cgcgccaagaacctgacgggcaaggaagccgaagccatcctcggttccgcgcacatcacc
tgcaacaagaacggcatcccgaacgacccgcaaaagccattcgtcacctcgggcatccgc
ctgggcagcccggcgatgacgacgcgcggtttcaaggaagcgcaagcggaagaagtgggc
aacctgatcgccgacgtgctggacaacccgcatgacgccgccaccatcgagcgcgtgaaa
gcggccgtgaaagtgctggccgacgcgcacccggtatacgcaccataa
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