Janthinobacterium lividum: G3257_11020
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Entry
G3257_11020 CDS
T06723
Symbol
sbcD
Name
(GenBank) exonuclease subunit SbcD
KO
K03547
DNA repair protein SbcD/Mre11
Organism
jlv
Janthinobacterium lividum
Brite
KEGG Orthology (KO) [BR:
jlv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
jlv03400
]
G3257_11020 (sbcD)
DNA repair and recombination proteins [BR:
jlv03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
G3257_11020 (sbcD)
Archaeal homologous recombinant proteins
G3257_11020 (sbcD)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SbcD_C
Metallophos
Metallophos_2
Motif
Other DBs
NCBI-ProteinID:
QKY02724
LinkDB
All DBs
Position
complement(2452731..2453957)
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AA seq
408 aa
AA seq
DB search
MRLLHTSDWHLGQTLHNYERGYEHQRFLDWLLDTLVAEQVDVLLVAGDVFDNANPSAASQ
KQLYVFLQQARARLPVLQLVVVAGNHDSAGRLEAPGPLLAAHGTHVIGHLLRGDDGQIDL
ERLLLPLTGSDGQVQAWCLAVPFLRPGDVPKLPAGDTQDAYLGGIALLYRQLADLALARR
QPGQAIIAMGHCHMVGGEMSNDSERRIVIGGTEMLPSGIFDAAIAYAALGHLHKAQAVGG
QQHIRYCGSPIPLSFAEVNYRHQVLCLDIDGEQLREVRAIEVPRAVPLLRVPATPAPIAE
VLEQLATLDVPAAPPEAQPFLEVRVRLDAPEPGLRTRIETALDGKQVRLAKIETSSAARS
SSPENMTLDQLGQLQPDDIFRRLYQQKYGQPAPPEQLSALAELLLPGA
NT seq
1227 nt
NT seq
+upstream
nt +downstream
nt
atgcgcctgctgcacacttccgactggcatctgggccagaccctgcacaattatgagcgg
ggctacgaacaccagcgcttcctcgactggctgctcgacacgctcgtggccgaacaggtc
gacgtgctgctggtggccggcgacgtgttcgacaacgccaacccttccgccgcctcgcaa
aagcagttatatgtattcctgcagcaggcgcgcgcgcgcctgccagtgctgcagctggtc
gtcgtcgccggcaaccacgattcggccggccgcctggaagcgcctggccccctgcttgcc
gcgcatggcacgcacgtgatcggccatttgctgcgtggcgacgatggccagatcgacctg
gaacgcctgctgctgccgctcaccggcagcgatggacaagtgcaggcctggtgcctggcc
gtgcccttcctgcgccccggcgacgtgccgaaactgccggccggcgatacccaggatgcc
tacctgggcggcatcgccctgctgtaccgccaactggcggacctggcgctggcgcgccgc
cagcccggccaagccatcatcgccatgggccactgccatatggtgggcggcgaaatgtcg
aacgactccgaacgccgcatcgtcatcggcggcaccgagatgctgccgtcggggattttt
gacgccgccatcgcgtatgcggcgctgggccatttgcacaaggcgcaggccgtgggcggc
cagcagcatatccgctactgcggcagcccgattcccctgtccttcgcggaagtgaattac
cgccatcaggtgctgtgcctcgatatcgacggcgagcaattacgcgaggtacgcgccatc
gaggtgccgcgcgccgtgccgctgctgcgcgtgcccgccacgccggcgccgattgccgaa
gtgctggaacagctggccaccctcgacgtgcccgcagcgccaccggaagcacagcctttc
ctggaagtgcgcgtgcgcctcgatgcgccggagccgggcctgcgcacgcgcatcgaaacg
gcgctcgacggcaagcaggtgcgcctggcgaagatcgaaacatcgagcgccgcgcgcagc
agctcgcccgaaaacatgacgctcgaccagttgggccagctgcagcccgacgacatcttc
cgccgcctgtaccagcaaaaatacggccagcccgcgccgcccgaacaactgtcggccctg
gccgaactgctgctgcctggcgcttga
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