Janthinobacterium lividum: G3257_11145
Help
Entry
G3257_11145 CDS
T06723
Name
(GenBank) ATP-dependent helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
jlv
Janthinobacterium lividum
Pathway
jlv03420
Nucleotide excision repair
jlv03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
jlv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
G3257_11145
03430 Mismatch repair
G3257_11145
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
jlv03400
]
G3257_11145
Enzymes [BR:
jlv01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
G3257_11145
DNA repair and recombination proteins [BR:
jlv03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
G3257_11145
MMR (mismatch excision repair)
Other MMR factors
G3257_11145
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
Viral_helicase1
AAA_12
AAA_30
Motif
Other DBs
NCBI-ProteinID:
QKY02745
LinkDB
All DBs
Position
2490076..2492022
Genome browser
AA seq
648 aa
AA seq
DB search
MSTDNAPQFIPKRITPTPEQVAIQTAQKKVVLIDANAGAAKTTTLALRLAEALHRGRAPE
RMLALVFTEAARVALRQRLLEVGVPLGVVKRLTVDTFDAFAAKVLRQLENMQVASMRSDE
ELRPVAWEALEVVSEKYAHRYPLEINTTNGAIAEFLKLQLRTKARLDFQNPDFESNSLDD
NLEMLGMSRTHYLWLREYEGLRGADTGDIQFRAPFDATYDLVRMLDGDEPLRQQLPAFQI
IVADELHDLNEASFRLLTMLIRRGNAFFCGAGDKDQVIYTWSGADHRFLRQRFEQEFPTL
QRLPLTASYRYGPQLAHAVGVLKNKASVSALSRATHIEVLQYEHTQPQACSAQLIAALEH
AHAGTTAILLRDRDQAIRVETALFQSGIAYGLVDMNSYLLSLEVLMLRGMVAIARKDLHT
IKSGPRRGEILEALVAFAEIPFTRGELQQAKADVANYPDLLEGFLTNQLAKSHNQDKAAL
TLAAVDYLRALPPDALAGDALQHIFGLMQLEQTARRIYVDPAQARVVARSLHGFIAVCRE
AGVALGGFAGWLGEMEEAVTVSTGKAKLVIACIDQIKGLEYNHVILPYLAVDEFPRSKTD
PLEEENRFYVAATRARDRLTLLTPEDPAYQSRYIAALQLKQKIIAPKS
NT seq
1947 nt
NT seq
+upstream
nt +downstream
nt
ttgagtacagataacgccccgcagttcattcccaaacgcatcacgcccacgccggagcag
gtcgccatccagacggcgcaaaagaaagtggtgctgatcgacgccaatgccggcgcggcc
aagacgacgaccctggccctgcgcctggccgaagcgctgcaccggggccgcgcgcccgag
cgcatgctggccctcgtgttcacggaggcggcgcgcgtggccctgcgccagcgcctgctg
gaagtgggcgtgccgctgggcgtcgtcaagcgcctgaccgtcgacactttcgatgccttt
gccgccaaggtgctgcggcagctggaaaacatgcaggtggcatccatgcgcagcgatgaa
gagttgcgcccggtagcctgggaagcgctggaagtcgtgtcggagaaatacgctcaccgc
tacccgctggaaatcaacacgacgaacggggcgatcgccgaattcttgaaactgcagttg
cgcaccaaggcgcgcctggattttcagaatcctgacttcgagagcaactccctggacgac
aatctggaaatgctgggcatgtcgcgcacgcattatctgtggctgcgcgaatatgaaggc
ttgcgtggcgccgacacgggcgacatccagttccgcgcgccattcgacgccacttacgac
ctcgtgcgcatgctcgacggcgatgagccgctgcgccagcaattgccggccttccagatc
atcgtggccgatgaattgcacgatttgaacgaagcgtcgttccgcctgctgaccatgctg
atacgccgcggtaatgcgtttttctgcggcgccggcgacaaggatcaagtcatctatacg
tggtcgggcgccgaccaccgcttcctgcgccagcgcttcgagcaggaatttcccaccttg
cagcgcctgccgttgacggcctcctaccgctacggcccgcaattggcgcacgccgtgggc
gtgctgaaaaacaaggccagcgtgtcggccctgtcgcgcgccacgcacatcgaagtgctg
caatacgagcatacgcagccgcaggcttgcagcgcccagctgatcgccgcgctcgaacac
gcgcatgcgggcacgacggccattttgctgcgcgaccgcgaccaggccatccgcgtggaa
acggcgttgttccagagcggcatcgcgtatggcctggtggacatgaacagctatctgctg
agcctggaagtgctgatgctgcgcggcatggtcgccatcgcccgcaaggatttacatacg
atcaagagcggcccgcgccgcggcgagatactcgaagccctggtggcgttcgcggaaatc
ccgtttacgcgcggtgagctccagcaagccaaggccgatgtggccaactatcccgacttg
ctggaaggcttcttgacgaaccagctggccaagtcgcacaaccaggacaaggcggccctg
accctggccgccgtcgattacctgcgcgcgctgccccccgatgccctggcgggcgacgcc
ctgcagcacatctttggcctgatgcagctggaacagacggcgcgccgcatctatgtcgac
ccggcccaggcgcgggtcgtcgcccgttccctgcatggttttattgccgtgtgccgcgaa
gcgggcgtggcgctgggtggctttgccggctggctgggcgagatggaagaagccgtgacg
gtctcgaccggcaaggccaaactcgtcatcgcctgcatcgaccagatcaagggcctcgaa
tacaaccacgtcatcttgccctacctggccgtcgatgaattcccgcgcagcaagaccgat
ccgctggaagaggaaaaccgcttctatgtggccgccacccgcgcgcgcgacaggctcacc
ctgctgacgccggaagaccccgcctatcagagccgctacatcgccgccctgcagctcaag
cagaagattattgcgccgaagtcatag
DBGET
integrated database retrieval system
