Janthinobacterium lividum: G3257_14730
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Entry
G3257_14730 CDS
T06723
Name
(GenBank) sigma-70 family RNA polymerase sigma factor
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
jlv
Janthinobacterium lividum
Pathway
jlv02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
jlv00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
G3257_14730
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
jlv03021
]
G3257_14730
Transcription machinery [BR:
jlv03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
G3257_14730
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_r4
HTH_23
PhyR_sigma-like
Sigma70_ECF
HTH_Tnp_ISL3
HTH_24
HTH_7
HTH_11
HTH_28
HTH_IclR
GerE
HTH_38
HTH_40
MarR
HAC6_helical
Motif
Other DBs
NCBI-ProteinID:
QKY03382
LinkDB
All DBs
Position
3311889..3312401
Genome browser
AA seq
170 aa
AA seq
DB search
MPPAQSGVHQEVGSLYHEHHRWLQGWLRHKLGNAFDAADVAHDTFMRLLNRDETIAAREP
RAFLTTVAKGVLGNLYRRRDLEAAYLETLASLPAQCAPDPEAQAILLEALFDIDRRLDGL
APAVRRAFLLSQLDGMPQAAIAAELHVSLATVQRYLVKAMHQCFFSRLAP
NT seq
513 nt
NT seq
+upstream
nt +downstream
nt
gtgccgcctgcccaatccggcgtccaccaggaggtgggcagcctgtatcacgaacatcac
cgctggctgcaaggctggctcaggcacaagctgggcaatgcgtttgacgcggccgacgtg
gcgcacgacaccttcatgcgcctgctcaatcgcgacgagaccatcgccgcgcgcgagccg
cgtgccttcctgacgacggtggccaagggcgtgctgggcaatctgtaccgccggcgcgac
ctggaggcggcctacctggaaaccctggccagcctgccggcgcaatgcgcgcccgacccg
gaggcacaggcgatcctgctcgaagccctgttcgacatcgaccgccgcctcgatggcctg
gcgcctgccgtgcgccgcgcctttctgctgtcgcagctcgatggcatgccgcaggcggcc
atcgccgccgagctgcatgtctcgctggccaccgtgcagcgctacctggtcaaggccatg
caccagtgtttcttttcccggctggcgccgtga
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