Janthinobacterium lividum: G3257_17560
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Entry
G3257_17560 CDS
T06723
Name
(GenBank) cryptochrome/photolyase family protein
KO
K06876
(6-4)DNA photolyase [EC:
4.1.99.13
]
Organism
jlv
Janthinobacterium lividum
Brite
KEGG Orthology (KO) [BR:
jlv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
jlv03400
]
G3257_17560
Enzymes [BR:
jlv01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.13 (6-4)DNA photolyase
G3257_17560
DNA repair and recombination proteins [BR:
jlv03400
]
Prokaryotic type
SSBR (single strand breaks repair)
Direct repair
G3257_17560
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DPRP
Glyco_transf_5
DUF4937
Motif
Other DBs
NCBI-ProteinID:
QKY03884
LinkDB
All DBs
Position
complement(3927055..3928596)
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AA seq
513 aa
AA seq
DB search
MTSPKPTLRLILGDQLNAQHRWFTEVDGATIYVLMEVRQETDYVLHHAQKILAIFAAMRD
LARQLRQLGHTVHYIAIDDMESTRSIPENIEALIRHYDACAFEYQAPDEWRLDQQLYQSG
RRSGIPWLMVDSDHFYTARHEAADIFAGRKQWLMEFFYRQMRSKHQVLMEDAKKPVGGQW
NFDHDNRKPWRGTPAEPQDARTVHDHSRLWQSIVAAGVKSFGAPHADRLAWALNRDEALQ
QLDAFLERALPHFGDFQDAMSVKAWRLFHSLLSFALNVKMLNPREVVARAQAAYQAGHAP
LAAVEGFIRQILGWREYVRGVYWAHMPGYAEKNFFGHARPLPSWFWDGKTKMHCLSQAIT
QSLEQAHAHHIQRLMVIGNFALLAGLDPARVHGWYMGIYIDAFEWVELPNTVGMSQFADG
GLLATKPYVSSAAYIDRMGDYCKGCHYDKKARIGERACPFNALYWDFFHRNADTLERNPR
IGMAYRQLEKMDAATVAAFRQQAATMLDSLDSL
NT seq
1542 nt
NT seq
+upstream
nt +downstream
nt
atgacctcaccgaagcccacactgcgcctgatactcggtgaccagctcaatgcgcagcat
cgctggttcaccgaagtcgatggcgccaccatctatgtcttgatggaagtgcggcaagaa
accgattatgtgctgcatcatgcgcagaaaatcctggcgatcttcgccgccatgcgtgac
ctggcgcgccagctgcgccagcttggccacaccgtgcattacatcgccatcgacgacatg
gaaagcacgcggtcgataccggagaatatcgaggcgctgattcgtcactacgacgcttgc
gccttcgaataccaggcacccgacgagtggcgcctcgaccagcagctgtaccagtcagga
cggcgctcgggcattccatggctgatggtcgacagcgaccatttctacacggcccgccat
gaggctgccgatattttcgccggacgcaagcaatggctgatggagtttttctaccgccag
atgcgcagtaagcatcaggtgctgatggaagacgcgaaaaagcccgtcggcggccagtgg
aacttcgaccacgataaccgtaaaccctggcgcggcacgcccgccgagccgcaggatgca
cgcaccgtacatgaccattcacggctatggcaaagcatcgtcgccgcaggcgtgaagagc
ttcggtgcgccgcatgccgaccggctggcgtgggcgctgaaccgggatgaggcgctgcag
cagctcgatgccttcctcgagcgggcattgccgcactttggcgacttccaggatgcgatg
agcgtcaaggcatggcgcttgtttcattccctgctgtcgttcgcgctgaacgtgaaaatg
ctcaatccgcgtgaagtcgtcgccagggcgcaagcggcttatcaggcgggccatgcgccg
ttggccgcagtcgagggtttcatccgccagatactgggttggcgcgaatatgtgcgcggc
gtctactgggcccatatgcccgggtatgccgagaagaatttcttcggccatgcgcgcccg
ttgccgtcctggttctgggatggcaaaacaaagatgcattgcctgtcgcaggcgattacc
cagtcgctggaacaggcccatgcgcatcatatccagcgcctgatggtgatcggtaatttc
gcgctgttggccggcctcgatccggccagggtgcatggctggtacatgggcatttatatc
gatgccttcgagtgggtggagctgcccaacaccgtcggcatgagccaattcgccgatggc
gggctgctggccaccaagccgtatgtctccagcgccgcgtatatcgaccgcatgggtgat
tattgcaaaggctgccattacgataaaaaggcacgcatcggcgagcgcgcctgcccattc
aatgccctgtactgggattttttccatcgcaacgcggacacattggaacgcaatccccgc
atcggcatggcgtatcgccagctggagaagatggacgcggcgacggtcgccgctttccgg
cagcaggcagccacgatgctggacagcctcgattccctgtag
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