Janthinobacterium lividum: G3257_21430
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Entry
G3257_21430 CDS
T06723
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
jlv
Janthinobacterium lividum
Pathway
jlv03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
jlv00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
G3257_21430 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
jlv03019
]
G3257_21430 (pnp)
03016 Transfer RNA biogenesis [BR:
jlv03016
]
G3257_21430 (pnp)
Enzymes [BR:
jlv01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
G3257_21430 (pnp)
Messenger RNA biogenesis [BR:
jlv03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
G3257_21430 (pnp)
Transfer RNA biogenesis [BR:
jlv03016
]
Prokaryotic type
tRNA degradation factors
G3257_21430 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
PNPase
S1
KH_1
KH_2
S1_RRP5
KH_KhpA-B
OB_RRP5_4th
DUF5813
KH-I_KHDC4-BBP
PCB_OB
Motif
Other DBs
NCBI-ProteinID:
QKY04556
LinkDB
All DBs
Position
complement(4808791..4810908)
Genome browser
AA seq
705 aa
AA seq
DB search
MFNKVTKTFQYGQHQVTLETGEIARQASGAVLVSIEDTVVLATVVARKDAKPGQDFFPLT
VDYVEKTYAAGKIPGGFFKREGRPSEKETLTSRLIDRPIRPLFPEGYLNEVQVIIHVLSV
NPEIDPDIAAMIGASAALCVSGVPFNGPIGAARVGYANGQYILNPTVQQLKTSEMDLVVA
GTETAVLMVESEAKQLSEEIMLGAVVFGHDQMKVVIDAIHDLVRDGGKPEVEWAPAPKNE
ALIARVAHFANAKINDAYQTKDKQERTAKLKAATSEVIADLSAEAAAAGGASIDSAEVNN
ILFDIEAKIVRTQILDGEPRIDGRDTRTVRPISIRTSVLPRTHGSALFTRGETQALVVAT
LGTARDSQKIDALMGEFTDSFMLHYNMPPFATGETGRVGTPKRREIGHGRLAKRALIAAL
PAAEEFSYSVRLVSEITESNGSSSMASVCGGCLALMDAGVPMKEHVAGIAMGLIKEGGKF
AVLSDILGDEDHLGDMDFKVAGTRNGITALQMDIKIMGITKEIMQVALAQAKEGREHILG
EMQKAMPHVKTELSDFAPRLITIKINPEKIRDVIGKGGAVIRALTEETGTQIDISDEGVV
TIASVDAAAGQEAKRRIEELTASVEVGKTYEGTVLKLLDFGAIVQVMPGKDGLLHISQIA
NERVNAVADYLKEGQLVRVKVLETDDRGRLKLSMKAAEGNEAPAA
NT seq
2118 nt
NT seq
+upstream
nt +downstream
nt
atgtttaacaaagttacgaaaaccttccagtacggtcaacaccaagtgaccctggaaacc
ggcgaaatcgcacgtcaggcatccggcgcagtgctggtgtcgatcgaagataccgtcgtt
ctggcaacggtagtggcacgcaaagatgccaagccaggccaggatttcttccctttgacg
gttgattatgtcgagaaaacctatgctgccggtaaaattccgggcggttttttcaagcgc
gaaggccgtccttccgaaaaagaaacactgacatcccgtttgatcgaccgtcctatccgt
ccgctgttcccggaaggctacctgaatgaagtgcaagtcatcattcacgtgttgtcggtc
aaccctgaaatcgatccggacatcgccgccatgatcggcgcatcggccgccctgtgcgta
tcgggcgtgcctttcaacggtcctatcggcgccgcgcgcgtcggttacgccaatggccag
tacatcctgaacccgaccgtccagcagctgaaaacgtcggaaatggacctggttgtcgcc
ggtaccgaaacggctgtgctgatggtcgaatcggaagcgaaacagctgtccgaagaaatc
atgctgggcgccgtggtcttcggccacgaccagatgaaagtcgtcatcgacgcgattcac
gacctggtgcgtgacggcggcaagccggaagtggaatgggcgcctgcgccgaaaaacgaa
gcactgatcgcccgcgtcgcgcattttgccaacgccaagatcaatgacgcgtatcaaacc
aaggacaagcaagagcgtacggccaagctgaaagcagcgacgtcggaagtgatcgccgac
ctgtcggccgaagcggctgccgccggcggcgcatcgatcgacagcgctgaagtcaacaac
atcctgttcgacatcgaagcgaaaatcgtgcgtacgcaaatcttggacggcgagccacgc
atcgacggccgcgacacgcgcaccgtgcgtccgatctcgattcgcaccagcgtgctgcca
cgcacccacggttcggccctgttcacgcgcggcgaaacgcaagcgctggtcgtggcgacg
ttgggcaccgcccgcgacagccagaagatcgatgcgctgatgggcgagttcaccgattcg
ttcatgctgcattacaacatgcctccgttcgccaccggcgaaacgggccgcgtcggtacg
ccaaaacgtcgcgaaatcggccacggccgcctggccaagcgcgcgctgatcgccgccttg
ccagcagctgaagagttcagctactcggtgcgcctggtgtcggaaatcacggaatcgaac
ggttcctcgtcgatggcatcggtgtgcggcggctgcctggcactgatggacgccggcgtg
ccgatgaaggaacacgtggccggtatcgccatgggcctgatcaaggaaggcggcaagttt
gccgtgctgtccgacatcctgggcgacgaagatcacctgggcgacatggacttcaaggta
gccggtacccgcaacggtatcacggcgctgcagatggacatcaagatcatgggcatcacc
aaggaaatcatgcaagtggcactggcgcaagccaaggaaggccgcgagcacatcctgggc
gaaatgcaaaaagccatgccgcacgtcaaaaccgaactgtccgatttcgcaccgcgtctg
atcaccatcaagatcaacccggaaaaaatccgtgacgtgatcggcaagggcggcgccgtg
atccgcgcgctgaccgaagagacgggcacccagatcgacatcagcgacgaaggcgtggtc
accatcgcttccgtcgacgctgctgccggccaggaagccaagcgccgcatcgaagaactg
accgcttccgtcgaagtgggcaagacctacgaaggcaccgtgctgaaactgctggacttc
ggcgccatcgtgcaagtcatgccaggcaaggacggcttgctgcacatctcgcagatcgcc
aacgagcgcgtcaacgccgtggccgactacctgaaagaaggccagctggtgcgtgtaaaa
gttctggaaacggacgaccgcggccgcctgaagctgtcgatgaaagctgccgaaggcaac
gaagcgccagccgcttaa
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