Janthinobacterium lividum: G3257_24915
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Entry
G3257_24915 CDS
T06723
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
jlv
Janthinobacterium lividum
Pathway
jlv03030
DNA replication
jlv03430
Mismatch repair
jlv03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
jlv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
G3257_24915 (dnaE)
03430 Mismatch repair
G3257_24915 (dnaE)
03440 Homologous recombination
G3257_24915 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
jlv03032
]
G3257_24915 (dnaE)
03400 DNA repair and recombination proteins [BR:
jlv03400
]
G3257_24915 (dnaE)
Enzymes [BR:
jlv01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
G3257_24915 (dnaE)
DNA replication proteins [BR:
jlv03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
G3257_24915 (dnaE)
DNA repair and recombination proteins [BR:
jlv03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
G3257_24915 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
DNA_pol_IIIA_C
Motif
Other DBs
NCBI-ProteinID:
QKY05167
LinkDB
All DBs
Position
complement(5601459..5604998)
Genome browser
AA seq
1179 aa
AA seq
DB search
MQEAGAPAGSQQAMQPGPAFVHLRVHSEYSIVDGLVRIDDVVKAAAKDKQVALAVTDLSN
LFGMVKFYKEARGKGIKPIVGVDVWITNDDNREKPSRLLLLAKNRMGYLQLCELLSTAWL
TNQYKGRAELRIEWLQALATNTYDLYPGESAENGLIVLSGAHFGDVGTAIENGNLALAER
NAQRWAEIFPGHFYIEIQRGGQANQEAQVRHAVALAAKLGLPVVATHPVQFISPEEFIAH
EARTCIAEGEMLANAKRVKRFNDSQRFLSQADMAELFADLPAALANSVEIAKRCNLTLTL
GKPQLPNFPTPDGMTIDQFLVAESQAGLEKRLLQLYPDPERREKERPRYESRLKFETDTI
CNMKFPGYFLIVAEFIQWAKENGVPVGPGRGSGAGSLVAYSLLITDLDPLQYNLLFERFL
NPERVSMPDFDIDFCQEGRDRVIQHVKDLYGKEAVSQIATFGTMAAKGAIRDVGRVMDFG
YNFCDGISKLIPFKPGKPVSIADAIEEEPLLKERLENEEEVKQLLDLAQQVEGITRNIGM
HAGGVLIAPGKLTDFCPLYTQGGDSGVVSQYDKDDVEAVGLVKFDFLGLTTLTILDRAVR
YIKQLDPAQANFDLATLPLNDKPSYDLLTKAKTVAVFQLESRGMQGMLKDARPDRFEDII
ALVALYRPGPMDLIPDFCKRKHGERFDYPDPRTESILSETYGIMVYQEQVMQMAQIVGGY
SLGGADMLRRAMGKKKAEEMAEHREIFRAGAAKDGLTAEKADEIFDLMEKFAGYGFNKSH
AAAYALLSYHTAYLKAHHTAAFMAANLSLAMDDTDKIKILVEDSLEICKLTLLPPDINES
DYRFMPSGAAPSVSGKKVTQIRYGLGAVKGSGQNAIEAIIAAREAGGPFTSLFDFCKRVD
KKQINRRTIESLIRSGAFDCLKVDRAILLASVAFAMECADQAAKAANQVSLFGGDDSDMV
APPEYVKVPVWTDKQRLTEEKIALGFYLSGHLFDSYAPEARRFARTKLSELSPSREPRMM
AGVITGLRTQMTQRGKILIVTLDDKSGTVEVTVYGELFDSNRKIFKEDEFLAVVGKVSED
RFSGGLRITAESAFDIIAARVQYGRQLGLTLPTTLDMKRISDVITPHRAADGLPIAAKVS
PQGVSCVLQFGDEWKVAPSDELQMALEQMLGAQEVAVEY
NT seq
3540 nt
NT seq
+upstream
nt +downstream
nt
atgcaagaggccggcgctccggcaggttcacagcaagcgatgcagcccggtcctgccttc
gtccacttgcgcgtgcactcggagtactcgatcgtcgatggcctggtgcgcatcgacgac
gtggtcaaggcggcggcgaaggacaagcaggtggcactggccgtcaccgacctgtcgaac
ctgtttggcatggtcaagttctacaaggaagcgcgcggcaagggtatcaaacccatcgtc
ggcgtggacgtgtggatcacgaatgacgacaaccgcgagaagccgtcgcggctgctgctg
ctggcgaagaaccgcatgggctatctgcagctgtgcgaactgctgtcgacggcctggctg
acgaaccagtacaagggccgcgccgaactgcgcatcgagtggctgcaggcgctggcgacg
aatacctacgacctgtacccgggcgaaagcgcggagaatggcttgatcgtgctgtcgggc
gcgcatttcggcgatgtcggcacggccatcgagaatggcaacctggccctggccgagcgc
aatgcgcagcgctgggccgagatttttcccggccatttctatatcgaaatccagcgcggc
ggccaggccaaccaggaggcgcaagtgcgccatgcggtggctctggcggccaagctgggt
ttgcccgtggtggccacgcatcccgtgcaattcatttcccctgaagaatttattgcccac
gaagcccgtacctgtatcgccgaaggcgaaatgctggccaacgccaagcgcgtgaaacgt
ttcaacgacagccagcgcttcctgtcgcaggccgacatggcggaactgttcgccgacttg
ccggccgcgctggccaattccgtggaaatcgccaagcgctgcaacctgaccctgaccctg
ggcaagccgcagctgccgaacttccccacgccggacggcatgacgatcgaccagttcctc
gttgccgagtcgcaggcgggcctggaaaaacgtttattgcagctgtatccggatcccgag
cgccgtgaaaaggagcgcccgcgctacgagtcgcgcttgaaattcgagacggacacgatt
tgcaacatgaaattccccggctacttcctcatcgtggccgagtttatccagtgggccaag
gaaaacggcgtgcccgtcggcccgggccgcggttcgggggcgggttcgctggtggcatat
tcgctgctcattaccgacctcgatccattgcagtacaacctgctgttcgagcgcttcctg
aatcccgaacgcgtctcgatgcccgacttcgatattgacttttgccaggaagggcgcgac
cgcgtcatccagcacgtcaaggatttgtatggcaaggaggccgtctcgcagatcgccacc
ttcggtaccatggcggccaagggcgcgatccgcgacgtgggccgcgtgatggacttcggc
tataacttttgcgacggcatctccaagctgatcccgttcaagccgggcaaaccggtgtcg
atcgccgacgccatcgaagaggaaccgctgctcaaggagcgcctggaaaacgaggaagag
gtcaagcagttgctggacctggcgcagcaagtcgaaggcatcacgcgcaatatcggcatg
cacgcggggggcgtgctgatcgctccgggcaagctgacggatttctgcccgctgtacacg
cagggcggtgattccggcgtcgtgtcgcagtacgacaaggatgacgtggaagccgtcggc
ctcgtgaagttcgactttttgggtctgacgaccctcaccatcctcgaccgcgccgtgcgc
tacatcaagcagctcgatccggcgcaggcgaatttcgacctggcgacgttgccgctgaac
gacaagccgtcgtacgacttgctgaccaaggccaagaccgtggccgtgttccagctggag
tcgcgcggcatgcagggcatgctgaaagacgcgcgtcccgaccgtttcgaggacattatc
gcgctggtggcgctgtaccgtccgggcccgatggacctgattcccgatttctgcaagcgc
aagcatggcgaacgcttcgactatcccgatccgcgcacggaatcgattctgtccgaaacc
tacggcatcatggtgtatcaggagcaggtgatgcagatggcgcagatcgtcggcggctac
tcgctgggcggcgccgacatgttgcgccgcgccatgggtaaaaagaaagccgaagagatg
gccgagcaccgcgagatcttccgcgccggtgccgcaaaagacggcttgacggcggaaaag
gccgacgagatcttcgacttgatggaaaagttcgccggctacggtttcaacaaatcgcac
gccgccgcctatgccttgctgtcctaccacacggcctacctgaaagcgcaccacacggcc
gccttcatggccgccaacttgtcgctggccatggacgacacggacaagatcaagatcctg
gtggaagactcgctggaaatctgcaagctgaccttgttgccgccggatatcaacgaatcg
gactaccgcttcatgccgagcggcgcggcgccgtccgtgagcggcaagaaagtcacgcag
atccgctatggcctgggcgccgtcaagggttccggccagaacgccatcgaagccatcatc
gccgcgcgcgaggcgggcgggccgtttacgagcctgttcgatttctgcaagcgcgtggac
aagaagcagatcaaccgccgcaccatcgagtcgctgatccgcagcggcgcctttgattgc
ctgaaggtcgaccgcgccatcctgctcgcgtccgtggcgttcgccatggaatgcgccgac
caggccgccaaggcggcgaaccaggtgagcctgttcggcggcgacgacagcgacatggtg
gcgccgcccgagtacgtcaaggtgcccgtgtggacggacaaacagcgattgacggaagaa
aagatcgcgctgggcttctacctgtccggccacctgttcgattcgtatgcacccgaggcg
cgccgttttgcgcgcacgaaattgtcggaattgtcgccgtcgcgcgaaccgcgcatgatg
gcgggcgtcatcacgggcttgcgcacgcagatgacgcaacggggcaagatcctcatcgtc
accctggacgacaagagcggcacggtggaagtgacggtgtacggcgaattgttcgactcg
aacaggaaaattttcaaggaagatgaattcctggccgtcgtgggcaaggtgtcggaagac
cgtttttcgggcggcttgcgcatcaccgccgagagcgccttcgacatcatcgccgcgcgg
gtgcagtatggccgccagctgggcttgactctgcccacgacgctggacatgaaacgcatc
agcgacgtgatcacgccgcaccgggctgcggacggactgccgatcgcagccaaggtcagc
ccgcagggcgtcagttgcgtgctgcagtttggtgacgagtggaaagtggcgccatcggat
gagttgcagatggcgctggagcaaatgctgggtgcgcaagaagtggcggtcgaatactga
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