Janthinobacterium lividum: G3257_26005
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Entry
G3257_26005 CDS
T06723
Name
(GenBank) sigma-70 family RNA polymerase sigma factor
KO
K07165
transmembrane sensor
Organism
jlv
Janthinobacterium lividum
Pathway
jlv02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
jlv00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
G3257_26005
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FecR
Sigma70_r4_2
Sigma70_r2
Sigma70_r4
Sigma70_ECF
HTH_24
HTH_23
TnsD
HTH_20
HTH_10
HTH_11
HTH_IclR
GerE
HTH_40
HTH_Tnp_ISL3
HTH_Crp_2
HTH_38
T3S_SPI-1_N0
DUF1804
PhyR_sigma-like
Cupin_2
RWP-RK
Retrotran_gag_2
MarR
HTH_28
LacI
HTH_7
HTH_36
Motif
Other DBs
NCBI-ProteinID:
QKY05365
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Position
5831595..5832911
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AA seq
438 aa
AA seq
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MPLAEPLQRQDIATLYADHHGWLQGWLRKKLGSTACAADMAHDTFVRLLDREDAVVAREP
RAFLATVAQRVLFNHYRRQKLEEAYLDVLAQLPPRHAPSPEERSLLLATVFELDRMLDGL
PPPVKRAFLLRQLDELPQEDIARQLGISLATVKRHLQRAASATQAWQQLQTQHEHLPPAM
QATLLRACVLANAPRRHAVKTLALLLACGTSLYAFERRGPWRWLTADYRTAVNQRRVVTL
DDGTRLTLNTSSAVNIVYNGEQRRIQLLAGEIFIATGKDAAQRPFFVDTPHGSLQALGTR
FTVRLHEQYASAGVLEGAVAVLADDGGQRLVLRPGEGAHFDGSGLHRQALAPYGGAWLDG
MLVARDMRLADFLAELSRYSDHPLACAPAVASLRVSGSYPLADVSAILDAVSASLQLRRN
TVTRFWGHQVVRIELAAR
NT seq
1317 nt
NT seq
+upstream
nt +downstream
nt
atgccgctggcagagccgctacaacgccaggacattgcgacactgtatgccgaccaccat
ggctggctgcagggctggctgcgcaaaaaactgggcagcacggcgtgcgcggccgatatg
gcgcatgacaccttcgtgcgcctgctcgaccgcgaagacgccgtcgtcgcgcgcgagccg
cgcgcctttctcgccaccgtcgcgcagcgcgtgctgttcaaccactaccgccgtcagaaa
ctcgaagaggcttacctcgacgtgctggcgcaactgccgccccggcatgcgccatcgccc
gaggaacggtcgctgctgctggccaccgtgtttgaactcgaccgcatgctcgacggcctg
ccgcctcccgtgaaacgggcttttttactgcgccagctcgacgagctgccgcaggaagac
attgcgcgccagctcggcatctcgctggcgacagtaaaacgccatctgcagcgtgccgcc
agcgccacgcaagcgtggcagcagctgcaaacgcagcatgaacacctgccgcccgccatg
caggcgaccctgctgcgcgcctgcgtgctggcgaatgcgccgcgccgccatgccgtcaag
acgctggccctgctgctggcctgcggcacctcgctgtatgcattcgaacgacgcggccca
tggcgctggttgacggccgactaccgcacggccgtcaaccagcgccgcgtcgtgaccctc
gacgacggcacgcggctcacgctcaacaccagcagcgccgtcaatatcgtttacaacggc
gaacagcgccgcattcaactgctggccggtgaaatcttcatcgccaccggcaaggatgcg
gcacagcggccgttcttcgtcgacacgccgcatggcagcctgcaggcgctgggcacgcgt
ttcacggtgcgcctgcacgagcaatatgccagcgccggcgtgctcgaaggcgccgtcgcc
gtgctggccgacgacggcggccagcgcctggtactgcgtcccggggaaggcgcccatttc
gacggcagcggcttgcaccgccaggcgctggcgccttatggcggcgcctggctggacggc
atgctggtggcgcgcgacatgcgcctggccgatttcctcgccgagctgtcgcgctacagc
gaccatccgctggcctgcgcgcccgccgtcgccagcctgcgcgtgtccggttcctacccg
ctggccgatgtcagcgccatcctcgacgccgtcagcgccagcctgcaactgcggcgcaat
accgtcacgcgcttctggggccatcaggtggtgcgcatcgaactggcggcccgctga
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