Janibacter melonis: EEW87_008200
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Entry
EEW87_008200 CDS
T06451
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
jme
Janibacter melonis
Brite
KEGG Orthology (KO) [BR:
jme00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
jme03016
]
EEW87_008200
Enzymes [BR:
jme01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
EEW87_008200
Transfer RNA biogenesis [BR:
jme03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
EEW87_008200
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
DNA_pol_A_exoN
HRDC
Motif
Other DBs
NCBI-ProteinID:
QFQ30306
UniProt:
A0A5P8FL85
LinkDB
All DBs
Position
965508..966779
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AA seq
423 aa
AA seq
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MSTAGGGPDESGPSEVRDLEEAAEQPTPAPLPVLSEPAEGVPDVVTTERGLLECAEAIAR
GSGPVALDAERASGYRYGQRAYLVQVRRDDAGTWLLDPMAVPDLSPLDRAIGSGEWLLHA
ATQDLACLAEVGLRPRQLFDTELAARLLGLPRVGLAAVVEHYLGLSLAKEHSAVDWSTRP
LPEPWLRYAALDVEVLGEVRNLMGIDLAVQGKAEWARQEFEALLTWQPAVKDDPWRRTSG
MHKIRKPRVLATVRELWYARDAIAQERDISPGRVVPDAALVAIAMESPTTAADLPTSPRS
VPRYGRHWLAAVERAAALPDSELPPVSVRTDAPPPQRSWPDRNPVAAARLATTREMLTAF
AEAHTIPVENVCAPDPLRRVVWTPPEQTDAAGFEAALAAHGVRPWQREVVAPMLAAAFEE
HTG
NT seq
1272 nt
NT seq
+upstream
nt +downstream
nt
atgagcaccgccggaggcggaccggacgagagcggtccctccgaggtccgtgacctcgag
gaggccgccgagcagcccacccctgctcctctgcccgtgctgtccgagccggccgagggc
gtgcccgacgtcgtgacgaccgagcgcggtctgctcgagtgcgccgaggcgatcgcccgc
ggcagcggccccgtggccctcgacgccgagcgggcctcgggctaccgctacggccagcgc
gcctacctcgtgcaggtgcgccgcgacgacgccggcacctggctgctcgacccgatggcc
gtgcccgacctctctccgctcgaccgcgcgatcggcagcggcgagtggctgctgcacgcc
gcgacccaggacctcgcctgcctcgccgaggtcggcctgcggccgcgccagctcttcgac
accgagctcgccgcccgtctgctcgggctgccccgcgtcggcctggccgccgtcgtcgag
cactacctcgggctgagcctggccaaggagcactcggcggtcgactggtcgacccgcccg
ctgcccgagccgtggctgcgctacgcggcgctcgacgtcgaggtgctcggcgaggtgcgc
aacctcatgggcatcgacctcgccgtgcagggcaaggccgagtgggcgcgccaggagttc
gaggcgctgctcacctggcagccggccgtcaaggacgacccgtggcggcgcacctcgggg
atgcacaagatccgcaagccgcgcgtcctcgcgaccgtgcgcgagctctggtacgcccgc
gacgccatcgcccaggagcgcgacatctcccccggccgggtcgtcccggacgcggcgctc
gtcgccatcgccatggagtccccgacgacagcggccgacctgccgacctcgccgcgcagc
gtgccgcgctacggccggcactggctcgccgcggtcgagcgggccgcggcgctgcccgac
tccgagctgcccccggtgtccgtgcgcaccgacgccccgccgccgcagcgcagctggccc
gaccgcaaccccgtcgccgcggcccggctcgcgacgacccgcgagatgctcacggccttc
gccgaggcgcacacgatcccggtcgagaacgtctgcgcgcccgacccgctgcgtcgcgtc
gtgtggacgccaccggagcagaccgacgccgccggcttcgaggcggcgctcgccgcgcac
ggcgtgcggccctggcagcgagaggtcgtcgccccgatgctggcggcagccttcgaggag
cacacgggctga
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