Janibacter melonis: EEW87_009420
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Entry
EEW87_009420 CDS
T06451
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
jme
Janibacter melonis
Brite
KEGG Orthology (KO) [BR:
jme00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
jme03016
]
EEW87_009420 (truB)
Enzymes [BR:
jme01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
EEW87_009420 (truB)
Transfer RNA biogenesis [BR:
jme03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
EEW87_009420 (truB)
Prokaryotic type
EEW87_009420 (truB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C
TruB_C_2
DKCLD
Motif
Other DBs
NCBI-ProteinID:
QGX08415
UniProt:
A0A650GEN2
LinkDB
All DBs
Position
complement(1239254..1240207)
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AA seq
317 aa
AA seq
DB search
MSRPASRPRRPFAGDGLVVLDKPAGWTSHDVVARCRGLYGTRKVGHAGTLDPMATGVLVI
GVGRGTKLLTFLVGCDKEYTATIRLGQRTVTDDAEGEVTASVDAAAVTDDAVAQGVAALT
GDIEQVPSSVSAIKVDGERSYARVRSGEQVDLPARPVTVSELVVLDRRAATADDGTAVVD
LDVRAVVSSGTYIRALARDLGEALGVGGHLTALTRTRVGGYHLDDAEDLAELTARAEDLE
ASMPLVPLADAAAASLAVRRLDEAQARALGYGQRIDSEQPGRTEPVAAIGPDGTLVAVLD
ESGARVRAHVVLAPAGS
NT seq
954 nt
NT seq
+upstream
nt +downstream
nt
gtgagccgccccgcctcgcgcccgcgtcgccccttcgccggcgacggtctcgtcgtcctc
gacaagccggcgggctggaccagccatgacgtcgtcgcccgctgccgcgggctgtacggc
acccgcaaggtcggacacgccggcacgctcgaccccatggccaccggcgtgctcgtcatc
ggcgtcgggcgcgggacgaagctgctgaccttcctcgtcgggtgcgacaaggagtacacg
gcgacgatccggctcgggcagcgcacggtcaccgacgacgccgagggcgaggtcaccgcg
agcgtcgacgccgccgcggtgaccgacgacgcggtcgcgcagggggtcgcggccctcacc
ggcgacatcgagcaggtgccgagctccgtgagcgcgatcaaggtcgacggcgagcggtcc
tacgcccgggtgcgctccggcgagcaggtcgacctgccggctcgcccggtgacggtctcc
gagctcgtcgtcctcgaccgccgtgctgcgaccgccgacgacggcaccgccgtcgtcgac
ctcgacgtgcgcgccgtcgtctcctcgggcacctacatccgtgcgctggcccgcgacctc
ggcgaggcgctcggggtcgggggccacctcaccgccctcacccgcacccgcgtcggcggc
taccacctcgacgacgcggaggacctcgccgagctcaccgcgcgtgccgaggacctcgag
gcgagcatgcccctcgtcccgctcgccgacgcggcggccgcctcgctcgccgtgcggcgg
ctcgacgaggcccaggcccgggccctcgggtacggccagcggatcgactcggagcagccc
gggcgcaccgagccggtcgcggccatcgggcccgacggcaccctcgtcgcggtgctcgac
gagtccggcgcgagggtgcgggcgcacgtcgtcctcgccccggccggcagctga
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