Janibacter melonis: EEW87_011935
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Entry
EEW87_011935 CDS
T06451
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
jme
Janibacter melonis
Pathway
jme03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
jme00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
EEW87_011935
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
jme03021
]
EEW87_011935
03400 DNA repair and recombination proteins [BR:
jme03400
]
EEW87_011935
Enzymes [BR:
jme01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
EEW87_011935
Transcription machinery [BR:
jme03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
EEW87_011935
DNA repair and recombination proteins [BR:
jme03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
EEW87_011935
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Motif
Other DBs
NCBI-ProteinID:
QFQ30876
UniProt:
A0A5P8FMU3
LinkDB
All DBs
Position
complement(1769666..1773565)
Genome browser
AA seq
1299 aa
AA seq
DB search
MLDVNFFDELRIGLASANDIRTWSHGEVKKPETINYRTLKPEKEGLFCERIFGPTRDWEC
SCGKYKRVRFKGIICERCGVEVTRAGVRRERMGHIELAAPVTHIWYFKGVPSRLGYLLDL
APKDLEKVIYFAAYMITSVDEDARHEQLPSLEAGIETERKAMENRRDADVDARAKKLEQD
IAALEAEGAKSDAKRKVRDSAEREMNQIRKRADQQIERLNQVWDRFKNLKVQDLEGDEVL
YREMRDRFGMFFEGGMGAAAIQKRLETFDLQAEQLALREIIATGKGQKKTRALKRLKVVT
AFLITDNEPAGMVLDVVPVIPPDLRPMVQLDGGRFATSDLNDLYRRVINRNNRLKRLLDL
GAPEIIVNNEKRMLQEAVDNLFDNGRRGRAVTGPGNRPLKSLSDMLKGKQGRFRQNLLGK
RVDYSARSVIVVGPQLKLHQCGLPKVMALELFKPFVMKRLVDLDHAQNIKSAKRMVERQR
SVVWDVLEEVITEHPVLLNRAPTLHRLGIQAFEPQLVEGKAIQIHPLVCTAFNADFDGDQ
MAVHLPLSAEAQAEARILMLSSNNILKPADGRPVTMPTQDMIIGLFHLTSALAVEDEEAP
LRSFSTVAEARMAYDAGQIQVGTPIRVRLGDVVPPLTAELPEGVERDEDGAVAVWTAPTT
LGRALFNEALPVHYPFVDEPVDKKRLSTIVNDLAERYSKGQVAASLDALKEAGYYWASRS
GTTVALSDVVTPSRKPEILEGYETKATKVQTQYERGLITDDERRQELIEIWTQATNEVAA
EMQQNFPKDNPIYRMVSSGARGNWFQLRQIAGMRGLMANPKGEIIPRPIRTNFREGLSVV
EFFISTHGARKGLADTALRTADSGYLTRRLVDVSQDVIVREDDCGTERGLPMLVAAYDET
TGTRRLHDDVEFTAYARCLASEVTGEDGSVLAAAGSDLGDVVIGQLYEAGVDEVKVRSVL
TCESKVGTCAKCYGRSLATGQLVDIGEAVGIIAAQSIGEPGTQLTMRTFHTGGVAGDDIT
QGLPRVVELFEARTPKGVAPIAEANGRITIEDTDKARRLLLTTDADGEEHAYPVSKRARL
LVEDGQHVEVGTQLVVGAIDPKQVLRILGPRATQKHLVDEVQHVYRQQGVSIHDKHIEVI
VRQMLRRITVLESGETGLLPGMLAERARFEEANRRTVAEGGRPAAGRPELMGITKASLAT
DSWLSAASFQETTRVLTEAAMEGKSDPLLGLKENVILGKLIPAGTGLARYNNTTVEPTEE
ARAAMYTLPSYDEYAYPVFGPGSGEAVRLDDAELGLDRL
NT seq
3900 nt
NT seq
+upstream
nt +downstream
nt
gtgctcgacgtcaacttcttcgacgagctgcgcatcggcctcgccagcgccaacgacatc
cgtacctggagccacggcgaggtcaagaagccggagaccatcaactaccgcaccctcaag
cccgagaaggagggtctgttctgcgagcgcatcttcggacccacccgggactgggagtgc
tcctgcggcaagtacaagcgcgtccgcttcaagggcatcatctgcgagcgctgcggcgtc
gaggtgacccgcgccggtgtgcgccgtgagcggatgggccacatcgagctcgccgccccc
gtcacccacatctggtacttcaagggcgtcccgagccgtctcgggtacctcctcgacctc
gccccgaaggacctcgagaaggtcatctacttcgcggcctacatgatcaccagcgtcgac
gaggacgcccgccacgagcagctgccctcgctcgaggccggcatcgagaccgagcgcaag
gcgatggagaaccgtcgcgacgccgacgtcgacgcccgggccaagaagctcgagcaggac
atcgcggccctcgaggccgagggtgccaagtccgacgcgaagcgcaaggtccgcgactcg
gccgagcgcgagatgaaccagatccgcaagcgcgccgaccagcagatcgagcgtctcaac
caggtctgggaccgcttcaagaacctcaaggtccaggacctcgagggcgacgaggtcctc
taccgcgagatgcgtgaccgcttcggcatgttcttcgagggcgggatgggcgccgcggcg
atccagaagcgtctcgagaccttcgacctgcaggccgagcagctcgcactgcgcgagatc
atcgcgaccggtaagggccagaagaagacccgcgccctcaagcgcctcaaggtcgtcacg
gccttcctcatcaccgacaacgagccggccggcatggtcctcgacgtggtcccggtcatc
cccccggacctgcgcccgatggtccagctcgacggcggtcgcttcgcgacctcggacctc
aacgacctgtaccgccgggtcatcaaccgcaacaaccgcctcaagcgactgctcgacctc
ggcgcgcccgagatcatcgtcaacaacgagaagcggatgctgcaggaggccgtcgacaac
ctcttcgacaacggccgtcgcggtcgcgccgtcaccggcccgggcaaccggccgctgaag
tcgctctccgacatgctcaagggcaagcaggggcgcttccgtcagaacctgctcggcaag
cgcgtcgactactcggcccgttcggtcatcgtcgtcggcccgcagctcaagctccaccag
tgcggtctgccgaaggtcatggcgctcgagctcttcaagcccttcgtcatgaagcggctc
gtcgacctcgaccacgcgcagaacatcaagtccgccaagcggatggtcgagcgtcagcgc
tcggtcgtgtgggacgtcctcgaagaggtcatcaccgagcaccccgtgctgctcaaccgt
gcgcccacgctgcaccgtctgggcatccaggccttcgagccgcagctcgtcgagggcaag
gccatccagatccacccgctcgtctgcaccgccttcaacgcggacttcgacggtgaccag
atggccgtgcacctcccgctctccgcggaggcccaggccgaggcccgcatcctcatgctg
tcctcgaacaacatcctcaagccggcggacggccgtcccgtgaccatgcccacccaggac
atgatcatcggcctcttccacctcacctccgccctcgcggtcgaggacgaggaggcgccg
ctgcgctccttctccacggtcgccgaggcgcggatggcctacgacgccggtcagatccag
gtcggcacgccgatccgggtgcgcctcggtgacgtcgtgccgccgctgaccgccgagctg
cccgagggcgtcgagcgcgacgaggacggcgcggtcgccgtctggaccgccccgaccacc
ctgggtcgcgccctcttcaacgaggcgctgccggtgcactaccccttcgtcgacgagccg
gtcgacaagaagcgcctgtcgacgatcgtcaacgacctcgccgagcgctactccaagggt
caggtcgcggcgtccctcgacgcgctcaaggaggccggctactactgggcctcccgctcc
ggcacgacggtcgcgctgagcgacgtcgtcaccccgtcgcgcaagcccgagatcctcgag
ggctacgagacgaaggcgacgaaggtccagacgcagtacgagcgcggtctcatcaccgac
gacgagcgccgtcaggagctcatcgagatctggacgcaggcgaccaacgaggtcgcggcg
gagatgcagcagaacttccccaaggacaacccgatctaccgcatggtcagctcgggtgcc
cgtggtaactggttccagctgcgccagatcgccggcatgcgtggcctcatggccaacccg
aagggcgagatcatcccccgcccgatccgcacgaacttccgtgagggtctgtcggtcgtc
gagttcttcatctccacgcacggcgcccgcaagggtctggccgacaccgcgctgcggacg
gccgactcgggctacctcacccgtcgtctcgtcgacgtctcccaggacgtcatcgtccgc
gaggacgactgcggcaccgagcgcggcctgccgatgctcgtcgccgcgtacgacgagacc
accggcacccgccggctgcacgacgacgtcgagttcaccgcgtacgcccgctgcctggcc
agcgaggtcaccggcgaggacggctccgtcctggccgccgcgggctccgacctcggcgac
gtcgtcatcggccagctctacgaggccggcgtcgacgaggtgaaggtccgctcggtcctc
acctgcgagtcgaaggtcggcacgtgcgcgaagtgctacggccgctcgctggccaccggt
cagctcgtcgacatcggcgaggccgtcggcatcatcgcggcgcagtcgatcggcgagccc
ggcacccagctgacgatgcgcaccttccacaccggtggtgtggccggtgacgacatcacg
cagggtctgccgcgcgtcgtcgagctcttcgaggcgcgcacgcccaagggtgtcgccccg
atcgcggaggccaacggccgcatcacgatcgaggacaccgacaaggcgcgccgtctgctg
ctgacgacggacgccgacggcgaggagcacgcctacccggtgagcaagcgcgcgcgcctg
ctcgtcgaggacggccagcacgtcgaggtgggtacccagctcgtcgtcggtgcgatcgac
ccgaagcaggtcctgcgcatcctcggcccgcgggcgacgcagaagcacctcgtcgacgag
gtgcagcacgtctaccgccagcagggcgtgtcgatccacgacaagcacatcgaggtcatc
gtgcgccagatgctgcgtcggatcaccgtcctcgagtcgggcgagacgggtctgctcccg
ggcatgctcgccgagcgcgcccgcttcgaggaggccaaccgccgcaccgtcgccgagggc
ggtcgtcccgccgcgggtcgtcccgagctcatgggcatcaccaaggcctcgctcgcgacc
gactcctggctctccgccgcctccttccaggagacgacccgcgtcctcaccgaggccgcg
atggagggcaagagcgacccgctgctcggcctcaaggagaacgtcatcctcggcaagctc
atccccgccggtacgggcctggcccgctacaacaacacgacggtggagccgaccgaggag
gcccgcgcggcgatgtacacgctgccgagctacgacgagtacgcctacccggtcttcggc
ccgggcagcggcgaggccgtccgcctcgacgacgcagagctcggtctcgaccgcctctga
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