Jannaschia ovalis: P8627_08185
Help
Entry
P8627_08185 CDS
T10628
Name
(GenBank) DNA topoisomerase IB
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
jov Jannaschia ovalis
Brite
KEGG Orthology (KO) [BR:
jov00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
jov03032
]
P8627_08185
03400 DNA repair and recombination proteins [BR:
jov03400
]
P8627_08185
Enzymes [BR:
jov01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
P8627_08185
DNA replication proteins [BR:
jov03032
]
Prokaryotic type
DNA Topoisomerases
P8627_08185
DNA repair and recombination proteins [BR:
jov03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
P8627_08185
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Top1B_N_bact
Topoisom_I
Motif
Other DBs
NCBI-ProteinID:
WGH80230
LinkDB
All DBs
Position
complement(1567934..1568899)
Genome browser
AA seq
321 aa
AA seq
DB search
MAPLPDLIYYPDDRPGITRRKAGRGWSYRAPDGTTIDDAAERARIDALAVPPAYADVWIS
PERRGHLQATGYDARTRKQYRYHEDWAAWRAMQKYEELPEFGAALPRLRRRVTEALKGEA
GERDFAIAAVLRLIDRLSIRVGTPEYRAENGTEGATTLRQGNLRSQDGKLRLDWTAKGGK
RVRRQLGDRRLVRALHDLADLPGAPLFEWIEGGTRYTVQADQVNDWLRDASGLEEATAKT
FRTWNGSVAALEAAMKAGEGVTIKTMADAAAKVLNNTATVARNSYIHPAVIDLSEDWRDV
AVPENPRGLRQGERALLSLLG
NT seq
966 nt
NT seq
+upstream
nt +downstream
nt
atggcaccgcttcccgacctgatctactaccccgacgaccggcccggcatcacccgccgg
aaggcggggcgcggctggtcctatcgcgcgcccgacggcacgaccatcgacgacgcggcg
gagcgtgcgcggatcgacgcgctggccgtgccgcccgcctatgccgatgtctggatcagc
ccggagcggcgcggccacctgcaggccaccggctacgacgcgcggacgcgcaagcagtac
cgctaccatgaggattgggcggcctggcgcgcgatgcagaaatacgaggagctgccggaa
ttcggcgccgccctgccgcgcctgcgccgccgcgtgaccgaggcgctgaagggcgaggcg
ggcgagcgcgacttcgccatcgccgcggtgctccgcctgatcgaccggctgtcgatccgc
gtcggtacgccggaataccgcgccgagaacgggaccgagggcgcgacgacgctgcgccag
ggcaacctgcgctcgcaggacggcaagctgcggctggactggaccgcgaagggcggcaag
cgcgtgcggcggcagctcggcgaccggcgcctcgtgcgggcgctgcacgatctggcggac
ctgccgggcgcgccgcttttcgaatggatcgagggcgggacgcgctacaccgttcaggcc
gaccaggtgaacgactggctgcgcgacgcgagcgggctggaggaggcgacggccaagacc
ttccgcacctggaacgggtcggtcgccgcgctggaggccgcgatgaaggcgggcgagggc
gtgacgatcaagaccatggccgacgccgccgcgaaggtgctgaacaacaccgcgaccgtg
gcgcggaactcctacatccatccggcggtcatcgacctgtccgaggattggcgcgacgtc
gccgtgccggagaacccgcgcggcctgcggcagggcgagcgcgcgctgctgtcgctgctg
ggctag
DBGET
integrated database retrieval system
