Jannaschia ovalis: P8627_08875
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Entry
P8627_08875 CDS
T10628
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
jov Jannaschia ovalis
Pathway
jov03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
jov00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
P8627_08875
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
jov03019
]
P8627_08875
03009 Ribosome biogenesis [BR:
jov03009
]
P8627_08875
Enzymes [BR:
jov01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
P8627_08875
Messenger RNA biogenesis [BR:
jov03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
P8627_08875
Ribosome biogenesis [BR:
jov03009
]
Prokaryotic type
rRNA helicases
P8627_08875
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
Cas3-like_C_2
AAA_22
Motif
Other DBs
NCBI-ProteinID:
WGH77173
UniProt:
A0ABY8LAI2
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All DBs
Position
1732173..1734005
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AA seq
610 aa
AA seq
DB search
MKPTLADALAARGYDTLTPVQTAVLDPALEGADMLVSAQTGSGKTLGFGLAIAPTLMGEA
DRFDAAAAPLALIVAPTRELALQVRRELAWLYEKAGAVLASTVGGMDMRDERRALARGAH
LVVATPGRLRDHITRGSIDLSAVRAVVLDEADEMLDLGFREDLEFILGACPKSRQTLLFS
ATVPAAIAKLAEGYQRDAKRVATASREAQHADIDYQAVTVAPRDGENAIINVLRFHEAPN
AIVFCNTRAMVNRLTTRLSNRGFPVVALSGELSQAERTHALQAMRDGRARVCVATDVAAR
GIDLPNLDLVIHAELPTGSDTLLHRSGRTGRAGRKGTSVLIVPPAAQKKAHRLLGWAKLS
ASWGPAPSAEAVLERDRERMLADPAWFEEMTESESPAVNDMTARFSPEQLALAYLRLRAE
RQTAPEELEDPAAAAAPRPREAFGPSRWFEVSGGRDRGLEPRRLLPMLCRAGQVTRDDIG
AIRIRETTSYVQLREGRAEAFARAVGGEIEDGLTLRPADGPPADDRKRGPGRDDRGPDRK
SAAPGRPRPDRTKPEDPTRDGAVTPGKPRTGAKFKPHKGKRADATGAPPPKGKPSSKKNK
ARAGKTPPRS
NT seq
1833 nt
NT seq
+upstream
nt +downstream
nt
atgaaaccgacacttgccgacgcgctcgccgcgcgaggatacgacacgctcacccccgtc
cagacggcggtgctcgacccggcgctcgaaggcgccgacatgctggtctcggcgcagacc
ggctcgggcaagacgctgggcttcggcctcgccatcgcgccgacccttatgggcgaggcc
gaccggttcgacgcggccgccgcgccgctggcgctgatcgtcgcgcccacgcgcgagctg
gcgctgcaggtccggcgcgagctggcctggctctacgagaaggcgggcgccgtgctggcc
tcgaccgtcggcggcatggacatgcgcgacgagcgccgcgccctggcgcgcggggcccat
ctggtcgtcgctaccccgggccgcctgcgcgaccacatcactcgcggctcgatcgacctg
tcggcggtgcgcgccgtggtgctggacgaggccgacgagatgctggacctcggcttccgc
gaggacctggagttcatcctcggggcctgccccaaatcgcggcagacgcttctgttctcg
gccacggtgcccgccgcgatcgccaagctggcagagggctatcagcgcgacgccaagcgc
gtggccaccgcttcgcgcgaggcgcagcatgccgatatcgactaccaggcggtgaccgtt
gcgccgcgcgacggcgagaacgcgatcatcaacgttttgcgcttccacgaggcgcccaac
gccatcgtcttctgcaacacccgcgcgatggtgaaccggctgaccacgcgcctgtccaat
cgcggcttcccggtcgtggccctctccggcgagctgagccaggcggagcggacccatgcc
ctgcaggcgatgcgcgacgggcgcgcccgggtctgcgtggcgaccgacgtggcggcgcgc
ggcatcgacctgccaaatctcgacctggtcatccatgccgagcttccgaccgggtcggac
acgctgctgcaccgctcgggccggacgggccgggccgggcgcaagggcacctcggtcctg
atcgtgccgcccgccgcgcagaagaaggcccatcgcctgctgggatgggcgaagctgtcg
gcgagttggggccccgccccttcggccgaggcagtgctggagcgcgaccgcgaacggatg
ctggccgatccggcctggttcgaggagatgaccgaaagcgagtcgcccgcggtcaacgac
atgaccgcgcgtttttcgcccgagcagcttgcgctggcctatctgcgcctgcgcgcggaa
cgccagaccgcgcccgaggagctggaggacccggccgccgccgcggccccgcgcccgcgc
gaggccttcggcccgagccggtggttcgaggtctccggcgggcgcgatcgcgggctggag
ccgcggcgccttctgccgatgctgtgcagggccgggcaggtcacgcgcgacgatatcggc
gcgatccgcatccgcgagacgacgagctacgtgcagctgcgcgagggccgggccgaggcc
ttcgcccgcgccgtgggcggtgagatcgaggacggcctgaccctgcgccccgccgacggc
ccgcccgccgacgaccgcaagcgcgggcccggccgcgacgaccggggccccgaccgcaag
tcggccgcccccggacggccccgcccggaccgcacgaagcccgaggatccgacccgcgac
ggcgcggtgacgccgggcaagccccggaccggggccaagttcaagccgcacaagggcaag
cgggccgatgcgacgggcgcgccgccgccgaagggcaagccctcgtcgaagaagaacaag
gcccgcgccgggaagactccgccgcgatcctga
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