Jannaschia ovalis: P8627_12745
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Entry
P8627_12745 CDS
T10628
Name
(GenBank) DNA-formamidopyrimidine glycosylase family protein
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
jov Jannaschia ovalis
Pathway
jov03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
jov00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
P8627_12745
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
jov03400
]
P8627_12745
Enzymes [BR:
jov01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
P8627_12745
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
P8627_12745
DNA repair and recombination proteins [BR:
jov03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
P8627_12745
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
NFACT_N
zf-FPG_IleRS
Ribosomal_S13
Motif
Other DBs
NCBI-ProteinID:
WGH77895
LinkDB
All DBs
Position
complement(2483004..2483795)
Genome browser
AA seq
263 aa
AA seq
DB search
MPELPEVEALRRRIEVRALNRTILAVTPGNDVTHIELPSAEERARLEGHQFTEARRHGKY
LFAGSASGPWMMLHMGMAGSIRVLDTDEPQADFIRLTVDFEGPRRLTFRDPRKFGWVRVI
DDPDAVIADHDLGPDALSIGEAGFADRVGTCRGAVKSALLDQGKLAGIGNLWADEALYQA
GIHPEARAADLSEEAVARLHRTAIRVLQSVCDTDATYSELPDAWLIHRREAGRACTRCDG
AIDKIKVGGRTSYHCPDHQDRAA
NT seq
792 nt
NT seq
+upstream
nt +downstream
nt
atgcctgagctgcccgaggtcgaggccctgcgccgccgcatcgaggtccgcgcgctcaac
cgcaccatcctcgcggtgacgcccggcaacgacgtgacccatatcgagctgccctccgcc
gaggagcgcgcccgcctcgaaggccaccagttcaccgaggcccggcgccacggcaaatat
ctcttcgcgggctccgcctcgggcccttggatgatgctgcacatgggcatggcgggctcg
atccgcgtgctcgacaccgacgagccgcaggccgatttcatccgcctcaccgtcgatttc
gagggcccccgccggctgaccttccgcgacccgcgcaaattcggctgggttcgggtaatc
gacgaccccgacgccgtgatcgccgaccacgacctcggccccgacgcgctgagcatcggc
gaagcgggcttcgccgaccgcgtcggcacctgccggggcgcggtgaaatcggcgcttctc
gaccagggcaagctggccggcatcggcaatctctgggccgacgaggcgctctaccaggcg
ggcatccatcccgaggcgcgcgccgcggacctctccgaggaggccgtcgcccgcctgcac
cgcaccgcgatccgcgtgctgcaatcggtctgcgacaccgacgccacctattccgaactg
cccgacgcctggctcattcaccgccgcgaagcgggccgcgcctgcacgcgctgcgacggc
gccatcgacaagatcaaggtgggcggacgcacgtcctaccactgtcccgaccaccaggac
cgcgccgcctga
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