Jannaschia ovalis: P8627_14375
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Entry
P8627_14375 CDS
T10628
Name
(GenBank) Rne/Rng family ribonuclease
KO
K08300
ribonuclease E [EC:
3.1.26.12
]
Organism
jov Jannaschia ovalis
Pathway
jov03018
RNA degradation
Brite
Enzymes [BR:
jov01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.12 ribonuclease E
P8627_14375
Messenger RNA biogenesis [BR:
jov03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
P8627_14375
Ribosome biogenesis [BR:
jov03009
]
Prokaryotic type
rRNA processing factors
P8627_14375
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-ProteinID:
WGH78202
LinkDB
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Position
2782651..2785740
Genome browser
AA seq
1029 aa
AA seq
DB search
MAKKMLIDATHPEETRVVVADGNKVEEFDFESLNKRQLAGNIYLAKVTRVEPSLQAAFVD
YGGNRHGFLAFSEIHPDYYQIPKADRDAILAEERAYAEAQAAADEAADDKARAARGEDES
DEDSIDEAPEAAAEEAPKKSRSRSRSRSRSRKKADTGDERQADDAGSNGDEGEAPAAEAV
AAEEAEEGPAVVTGTGPELSEAAESAAPEEGSEADAPEADATDGPNRTIAESAGLEDETR
GEDDAPEPAEGASEAEAQPDADPAPETTDEDGASQAEARPDPKGMETVDADAADDAGEDS
DAATDAAVEGSDDSDEKPKRKSRSRSRSRGHKKAADEKDDSVETVADDDEPEEIRPARKP
RPRKYKIQEVVKVRQIMLVQVVKEERGNKGAALTTYLSLAGRYCVLMPNTARGGGISRKI
TNAADRKKLKEIASEIDVPQGAGLIVRTAGAKRTKTEIKRDYEYLQRQWEQVRELTLKSI
APAPIYEEGNLIHRSIRDYYSRDIDEVIVDGEAGYREAKAYMKLIMPSHAKNVKLHDGGG
LPLFAKYGVESYLAGMFNPTVQLKSGGYIVIGITEALVAIDVNSGKSTKEGSIEDTAVKT
NLEAAEEVARQAKLRDLAGLIVIDFIDMDERKNNAAVEKRLKDALKHDRARIQVGRISGF
GLLEMSRQRLRPGMLEATTQACPHCQGTGLIRSDDSVALGILRALEEEGTRKRSREVLLK
LPVDICNYLMNEKREHLAQIEARYDMAVRVTADPSLVAPDFHMEKFKTATRVVPKPAATV
VGMDTSWTPEEDEDEDDIVEAEAEEASDDRDEGEARGRGRSESGENGENGEGSGKKKRRR
RSRRRKKGDENGNAEAGESADQGQAASEAGEPRPDEVAAPEMPPQDAVPETTQADAPDVP
QAEEGEKPKSRSRSRSRKKAPAPEVESPSEAQPEMAEAVDAPVAEAAPAEAEAPAAPEAA
QKPKRKTRVRAKAPAPSEPVQEAADAAAEAAPEPEPEPEPQPAPEPEAETAAEEGEAKPK
RRGWWSFGT
NT seq
3090 nt
NT seq
+upstream
nt +downstream
nt
atggcgaagaaaatgctgatcgacgccacccacccggaggagacccgggtcgtggtggca
gacgggaacaaggtcgaggagtttgacttcgagagcctgaacaagcggcagcttgcgggc
aacatctatctggcgaaggtcactcgggtggagccgtcgctccaggccgccttcgtcgat
tacggcggaaaccggcacggcttcctcgccttctcggaaatccatcccgattactaccag
atccccaaggccgatcgcgacgcgatcctggccgaggagcgcgcctatgccgaggcgcag
gccgccgccgacgaggccgcggatgacaaggcacgcgccgcgcgcggagaggacgagtcc
gacgaggacagcatcgacgaggcgcccgaggccgcggccgaggaggcgcccaagaagtcc
cgcagccgctcgcgcagccggtcccggtcgcgcaagaaggccgacacgggtgacgagcgc
caagcggacgacgccgggtcgaacggcgatgagggcgaggcgcccgccgccgaggctgtg
gctgcggaggaggccgaggaaggcccggccgtcgtgaccggcaccggtcccgaactgtcc
gaggccgccgaaagcgcggctccggaagaagggtccgaggcggatgcgcccgaggcggat
gccacggacggcccgaaccggacgatcgcggagagcgcgggcctcgaggacgagacccgc
ggcgaggacgacgcaccggagcccgccgaaggcgcctccgaggcggaggcccagccggat
gccgatccggcccccgagaccaccgacgaggacggcgcgtcgcaggccgaggcccgcccc
gaccccaagggcatggaaaccgtcgatgccgacgcggccgacgatgccggggaggactcc
gacgcggcaaccgacgcggcggtggaaggctccgacgacagcgacgagaagcccaagcgc
aagtcgcgcagccggtcccgctcgcgcgggcacaagaaggctgccgacgagaaggatgac
agcgtcgagaccgtcgccgatgacgacgagcctgaggagatccgcccggcgcgcaagccg
cgcccgcgcaagtacaagatccaggaggtcgtgaaggtccgccagatcatgctcgtgcag
gtcgtcaaggaggagcgcggcaacaagggcgccgcgctgaccacctatctcagcctcgcg
ggccgttactgcgtgctgatgccgaacacggcgcggggcggcgggatcagccgcaagatc
accaatgcggccgatcgcaagaagctcaaggagatcgcctccgagatcgacgtgccgcag
ggcgcgggcctgatcgtgcgcacggcgggcgccaagcgcaccaagaccgagatcaagcgc
gactacgaatacctccagcggcaatgggagcaggtgcgcgagctcacgctcaaatccatc
gcgcccgcgccgatctacgaggaaggcaacctgatccaccgctcgatccgcgactattac
agccgcgacatcgacgaggtgatcgtggacggcgaggccggctaccgcgaggccaaggcc
tacatgaagctgatcatgccctcccacgccaagaacgtgaagctgcatgacggcggcggg
ctgccgctcttcgcgaaatacggggtcgaatcctacctcgcggggatgttcaacccgacc
gtccagctgaaatcgggcggctacatcgtcatcggcatcaccgaggcgctggtcgccatc
gacgtgaactcgggcaagtcgacgaaggaaggctcgatcgaggacaccgcggtcaagacc
aacctggaggccgccgaggaggtcgcccgccaggccaagctgcgcgatctcgcggggctg
atcgtcatcgacttcatcgacatggacgagcgcaagaacaacgccgccgtcgagaagcgg
ctgaaggacgcgctcaagcacgaccgcgcccgcatccaggtcggccgcatctcgggcttc
ggccttctggagatgtcgcgccagcggctgcggccgggcatgctggaggccacgacgcag
gcctgcccgcattgccagggcacggggctgatccggtccgacgattcggtcgcgctcggc
attttgcgcgcgcttgaggaggaggggacgcgcaagcggtcgcgcgaggtgctgctcaag
ctgccggtcgatatctgcaactacctgatgaacgagaagcgcgagcatctggcgcagatc
gaggcgcgctacgacatggccgtccgcgtgaccgccgacccgtcgctggtggcgcccgac
ttccacatggagaagttcaagaccgccacgcgggtcgtgccgaaaccggcggcgaccgtg
gtcgggatggacacctcctggacgcccgaagaggacgaggacgaggacgatatcgtcgag
gcggaggccgaggaggcgtccgacgaccgcgacgagggcgaggcccggggccgcggccgg
tccgagtccggcgaaaacggcgaaaatggtgaaggtagcggcaagaagaagcgccgccgc
cgttcgcggcgtcgcaagaagggcgacgagaacggcaatgccgaggcgggcgaaagcgcc
gatcagggccaggccgcctccgaggcgggcgagccccggccggacgaggtcgccgcaccc
gagatgccgccgcaggacgccgtgcccgagaccacgcaggccgacgcgcccgacgtgccg
caggccgaggagggcgagaagccgaaatcccgctcgcgcagccgctcgcggaagaaggcg
cccgcgcccgaggtcgagagcccgtccgaggcgcagcccgagatggccgaggccgtggat
gcgcccgtagccgaggcggcgcccgccgaggcggaggccccggcggctcccgaggccgcg
cagaagccgaagcgcaagacacgcgtccgcgccaaggcgcccgcgccctccgagccggtg
caggaggcggccgacgccgcggcggaggcggcgcccgagccggagcctgagccggagcct
cagcccgcgcccgaaccggaggcggagaccgccgccgaggagggcgaggccaagcccaag
cggcgcggttggtggtccttcggcacctga
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