Jeotgalibaca porci: G7058_02410
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Entry
G7058_02410 CDS
T06496
Name
(GenBank) ribonuclease J
KO
K12574
ribonuclease J [EC:3.1.-.-]
Organism
jpo
Jeotgalibaca porci
Pathway
jpo03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
jpo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
G7058_02410
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
jpo03019
]
G7058_02410
Messenger RNA biogenesis [BR:
jpo03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
G7058_02410
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Gene cluster
GFIT
Motif
Pfam:
RNase_J_b_CASP
RNase_J_C
Lactamase_B
RMMBL
Lactamase_B_2
Anti-Pycsar_Apyc1
DUF4453
PDEase_II
CFAP54_N
Motif
Other DBs
NCBI-ProteinID:
QIK51004
UniProt:
A0A6G7WFF1
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Position
461698..463374
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AA seq
558 aa
AA seq
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MKPNIRNNEVGVFALGGLGEIGKNMYAVQYQDELIILDSGVMFPEDDLLGIDYVIPDYSY
LVQNKNKIKGLFISHGHEDHIGGIPFLLKELNIPIYAGEIALALIRNKLEEHGLLRDAVL
HEIKDDTVIKFRKTSVSFFRTTHSIPDTRGIVVKTPPGNIVFTGDFKFDFTPVDGSPADL
HRLAQLGDEGVLLLLSDSTNAEIPEFTKSEQVVGQSLSNIIQKVEGRIIFASFASNISRL
QQVAEVAIETGRKIAIFGRSMENSFRTARELGYISAPDDTFIDGRELNQYPADKVLIVCT
GSQGEPMAALSRISNGTHRQITIQPSDTVIFSSSPIPGNTASVNRVINQLLEAGAHVIHG
RLNNVHTSGHGGQQEMKLMLRLLKPKYFMPVHGEFRMLKIHAGLAELCGVPRENCFILDN
GEIIALTSDTARPAGDFPAMDVYVDGKGIGDIGNIVLRDRRILSQDGLVVVVMTVDFNSR
QLVAGPDILSRGFIYMRESGDLISEAQGIIKKNVNEALASNNKLNERRLKDTVIDAVQPF
LYEKTERRPMIVPVIMPL
NT seq
1677 nt
NT seq
+upstream
nt +downstream
nt
atgaaaccaaatatacgcaataatgaagtaggagtttttgccttagggggtttaggcgaa
atcggtaaaaatatgtacgccgttcaatatcaagacgaacttattattcttgattctggc
gtcatgttccccgaagatgatctattaggaattgactatgttattccagactactcttat
ctcgtacagaacaaaaacaagattaaaggtctctttatttctcacggacacgaagaccac
atcggtggtattcctttcctactaaaagaattaaatattcctatctatgcgggcgaaatc
gccttagcgcttatccgcaacaagttggaagaacacggcctcttacgtgacgctgttctc
catgaaattaaagacgacacagtgattaagttccgcaaaacaagcgtcagcttcttccgt
accactcacagtattccggatacacgcggaattgtcgtgaagacaccacctggtaacatt
gtttttaccggtgacttcaagtttgatttcacgcccgttgatggaagtcctgctgatttg
caccgtcttgcacaacttggtgatgaaggcgtcctattgcttctaagtgacagtacaaac
gcagaaattcctgagtttactaaatctgagcaagttgtgggccagtccctatccaacatt
attcaaaaagttgaaggacggattatctttgcatctttcgcttcaaacatctcccgtttg
caacaggtagctgaggttgccattgaaacaggaagaaaaattgctattttcggtcgtagt
atggagaactctttccgcactgcccgggaacttggttatatttcagcaccggatgatact
tttatcgatggccgcgaattgaaccaatacccggccgacaaagtattgatcgtttgtacc
ggttctcaaggtgagccaatggccgctttaagtcgtatttcgaatggtacgcaccgtcaa
attacaattcaaccatctgacacagttattttctcaagttcaccaattcctgggaataca
gcgagtgtaaaccgcgtaatcaaccaactattggaagctggcgcacatgttattcatggt
cgcttaaacaatgttcatacttctggacacggtggacaacaagaaatgaaactgatgctt
cgtctattgaagcctaaatatttcatgcctgtccatggggaattcagaatgttgaagatt
catgctggtctagctgaactatgtggcgtaccgcgtgaaaattgcttcatcttggataac
ggtgaaattattgctcttaccagcgatacagcgcgtccagcgggagattttcctgcaatg
gatgtgtatgtagatggaaaaggaatcggtgatatcggtaatatcgttttacgtgaccgt
cgtattctttctcaagatggtttagtcgttgttgttatgacagttgattttaattcgcgc
caattggttgcaggtccggatatcctttcacgtggttttatctatatgcgtgaatctggc
gacctcatcagtgaagcgcaaggaatcatcaagaaaaacgttaatgaagcactcgcttct
aacaacaaattaaacgaacgtcgcttgaaagatacggttattgatgccgttcaacctttc
ttgtatgaaaaaacagaacgtcgcccaatgatcgttccagttatcatgccactataa
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