Jeotgalibaca porci: G7058_05600
Help
Entry
G7058_05600 CDS
T06496
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
jpo
Jeotgalibaca porci
Pathway
jpo03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
jpo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
G7058_05600
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
jpo03019
]
G7058_05600
03009 Ribosome biogenesis [BR:
jpo03009
]
G7058_05600
Enzymes [BR:
jpo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
G7058_05600
Messenger RNA biogenesis [BR:
jpo03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
G7058_05600
Ribosome biogenesis [BR:
jpo03009
]
Prokaryotic type
rRNA helicases
G7058_05600
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
CMS1
UTP25_NTPase-like
Motif
Other DBs
NCBI-ProteinID:
QIK51566
UniProt:
A0A6G7WH56
LinkDB
All DBs
Position
complement(1099692..1101149)
Genome browser
AA seq
485 aa
AA seq
DB search
MENKTFETFGISPEIIKALTSLRYYSPTPVQEEVLPLALKKADIIVESQTGSGKTAAFGI
PLCEDAVWEENKPQALILVPTRELALQIQEEIMNIGRLKRIKVTAVFGKSSFKTQKSELK
QKSHIVVGTPGRVLEHLKEGTLSVEKVRTVVLDEADEMLHMGFIDQVEAIIDYLPKNRQT
MLFSATMPPEVARLATFYMREDRVSVKMDQSPDNQPRIYQSYIRVSEEKKNDVLIDLLTV
ANPEAAIIFCNTKDVVDDVDAFLAKKGLLVDKLHGGMDQDDRLAVMTDFRSGKIRYLVAT
DVAARGIDIDHVTHVMNYDVPFENESFIHRTGRTGRAGKEGQAMTLVSDKGAYRWQEVVA
FVFEGKEGPVEIQAPSTRVVQRAKVAFDKKNQEPMRPKVARNKELNRDITKVYFNGGKKK
KLRAIDFVGTLTNIKGVEADDIGIITIQENVTYVEILNGMGPYVIAEMQDRTIKGKNLKV
RKARK
NT seq
1458 nt
NT seq
+upstream
nt +downstream
nt
atggaaaataaaacatttgaaacattcgggattagtcctgaaataattaaggcactgacg
agtttgcgttattacagcccgactcctgttcaggaagaagttctccctttggctttgaaa
aaagcggatattatcgttgagtcacaaacaggaagtggtaaaacggcagcttttgggatt
cctttgtgcgaggatgcagtttgggaagagaataaaccccaagcgctcattcttgtaccg
acccgtgaattggcactccaaattcaagaagaaatcatgaacatcgggcgtttgaaacgt
atcaaagtgactgcggtttttggaaaatcgtccttcaaaacgcaaaagtcggaattgaaa
caaaagagccatattgtagtgggaacgcccggccgtgtcttagagcatttgaaagaaggc
acattgtctgtcgagaaagttcgcacggttgtattggatgaagcggacgaaatgttacat
atgggattcattgaccaagtagaagcaatcattgattacttgcctaagaatcgtcaaacg
atgctgttttcggcaactatgccgccggaagtggcgcgtttagcaactttttacatgcgt
gaagaccgtgtgtctgtgaaaatggatcaatccccggacaatcaaccgcgtatctatcag
tcgtacatccgcgtttccgaagaaaagaaaaatgatgtcttgattgatttattgactgtt
gcgaatccggaagcagccattattttctgtaatacaaaagatgttgtggatgacgtggat
gcatttttagctaaaaaaggattgcttgtcgataaactccatggtgggatggatcaagac
gaccgtctggcggtcatgaccgatttccgttctggaaaaatccgttacttagttgcaaca
gatgttgcggcccgcggaattgatattgatcatgtgacgcacgttatgaactacgacgtt
ccgtttgaaaatgaaagcttcattcaccgtacaggtcgtacaggccgtgcgggtaaagaa
ggccaagcgatgactttggttagcgataaaggtgcgtaccgttggcaagaagtagttgct
tttgtattcgaaggtaaagaaggtcctgtagagattcaggctccgagtacgcgtgtagtt
cagcgtgctaaggttgcatttgataagaaaaatcaagaaccgatgcgtccgaaagtggcc
cgtaataaagaattgaaccgggatattacaaaagtttacttcaacggcggtaaaaagaag
aaactgcgcgctattgatttcgtgggcacattgacgaatatcaagggtgttgaagctgat
gatatcgggattatcacgattcaggagaatgttacgtatgtggaaattttgaatggcatg
ggtccttatgtgattgcagaaatgcaagaccgcacgattaaagggaagaaccttaaagtt
cgtaaagcccgtaagtaa
DBGET
integrated database retrieval system
