Jeotgalibaca porci: G7058_06585
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Entry
G7058_06585 CDS
T06496
Symbol
rpoB
Name
(GenBank) DNA-directed RNA polymerase subunit beta
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
jpo
Jeotgalibaca porci
Pathway
jpo03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
jpo00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
G7058_06585 (rpoB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
jpo03021
]
G7058_06585 (rpoB)
03400 DNA repair and recombination proteins [BR:
jpo03400
]
G7058_06585 (rpoB)
Enzymes [BR:
jpo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
G7058_06585 (rpoB)
Transcription machinery [BR:
jpo03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
G7058_06585 (rpoB)
DNA repair and recombination proteins [BR:
jpo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
G7058_06585 (rpoB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_2
RNA_pol_Rpb2_3
RNA_pol_Rpb2_7
RNA_pol_Rpb2_45
RNA_pol_Rpb2_1
Motif
Other DBs
NCBI-ProteinID:
QIK51725
UniProt:
A0A6G7WHG3
LinkDB
All DBs
Position
1270379..1273924
Genome browser
AA seq
1181 aa
AA seq
DB search
MLGHNVNYGKHRTRRSYSRISEVLELPNLIELQTDSYKWFLDKGLKEMFADISPIEDHTG
NLALEFLDYELQTPKYTVSEARQHDANYSAPIYVKLRLINKETGEIKDQEVFFGDFPLMT
DMGTFVINGAERVIVSQLVRSPGVYYHNKIDKNGKETFGNTMIPNRGAWMEFETDAKDIS
YVRIDRTRKIPLTVLIRALGFGSDDQIFEIFGNNDSLKLTAEKDVHKVSSDSRVEEGLKD
VYERLRPGEPKTAESSRNLLYARFFDPRRYDLAPVGRYKLNKKLNIKTRLYNQILAETLV
DPETGEIIAEKGTELNREVMDRLVPYLDNGLNEVILQPSEDGVVVEPVRIQVVKVYSQVD
PEKEVNIIGNGEVDTEIKNLTTADVFASINYFFNLYEGLGNKDDIDHLGNRRIRSVGELL
QNQFRIGLSRMERVVRERMSIQDISTVTPQQLINIRPVVASIKEFFGSSQLSQFMDQQNP
LSELTHKRRLSALGPGGLTRDRAGYEVRDVHYSHYGRMCPIETPEGPNIGLINSLSSYAK
INEYGFIETPYRRVDWSTHKVTDTIDYLTADEEDNFVVAQANSVLNEDGSFANDIVMARY
IHDNLEVPVERVDYMDVSPKQVVAVATACIPFLENDDSNRALMGANMQRQAVPLINPKAP
LVGTGMEYVAAHDSGAALLCENDGVVEYLDASEIRIRRDNGTLDKYPVIKFQRSNAGSCY
NQRPIVRVGERVEKGDIMADGPSMEDGEMALGQNILVAFMTWEGYNYEDAVIMNERLVKD
DVYTSIHIEEYESEARDTKLGPEEITREIPNVGEDALKDLDERGIIRIGAEVRDGDILVG
KVTPKGVTELSAEERLLHAIFGEKAREVRDTSLRVPHGGGGIVHDVKVFTREAGDELSPG
VNLLVRVYIVQKRKINEGDKMAGRHGNKGVVSRIMPEEDMPYLPDGTPVDIMLNPLGVPS
RMNIGQVLELHMGMAARELGIYIASPVFDGANEEDVWGTVEEAGMAKDAKTILYDGRTGE
PFDNRVSVGIMYYLKLSHMVDDKLHARSTGPYSLVTQQPLGGKAQFGGQRFGEMEVWALE
AYGAAYTLQEILTYKSDDVVGRVKTYEAIVKGEPIPKPGVPESFRVLVKELQALGLDMKV
LDENREEIELRDMDDEDEVVNFERLNKQTEVKKDDTEGQRG
NT seq
3546 nt
NT seq
+upstream
nt +downstream
nt
ttgttaggacataatgtcaattacggtaaacaccgtacccgcagaagttattcacgaatc
agtgaagtattggaacttcccaacctgattgaacttcaaacggattcgtataagtggttc
ttggataaaggactaaaagaaatgtttgcggatatttctccgattgaagatcatacaggt
aacttagctttggaattcttggattacgaactacaaacgcctaagtatactgtttcagaa
gcacgtcaacacgatgctaactattcagcacctatttatgtaaaactacgtctgattaac
aaagagacgggcgaaatcaaagaccaagaagtattctttggtgatttcccgcttatgaca
gacatgggtacattcgttattaatggggcagagcgtgttattgtatcgcaattagtacgt
tcacctggtgtgtactaccacaacaagatcgacaaaaacggtaaagaaacatttggtaac
acaatgattcctaaccgtggtgcgtggatggaattcgaaacagatgcaaaagatatttct
tacgtgcgtatcgaccgtacaagaaagattcctttgactgttttaattcgtgcactagga
tttggttctgatgaccaaatcttcgaaatctttgggaataacgacagcttgaaattgaca
gctgagaaagatgttcacaaagtttcttcagactcacgtgttgaagaaggcttgaaagac
gtttacgaacgtctgcgtccaggcgaacctaaaacagcggaaagctcacgtaacttgctt
tacgcacgtttcttcgacccaagacgttatgacttggctccagttggtcgctacaagtta
aacaaaaaactaaacatcaaaacaagactatacaaccaaatccttgctgaaacattggta
gaccctgaaacaggcgaaatcattgctgaaaaaggaacagaattgaaccgtgaagtaatg
gatagattagttccatatttggacaacggtctaaacgaagttattttacaaccatctgaa
gatggtgtggttgtagaacccgttcgtattcaagttgtaaaagtttattcacaagtggat
cctgaaaaagaagtcaacatcatcggtaacggcgaagtagacactgaaatcaagaacctg
acaacagctgacgtatttgcttctattaactacttcttcaacttgtatgaaggattagga
aacaaagacgatatcgaccacttaggtaaccgtcgtatccgttcagttggtgagttacta
caaaaccaattccgtattggtctatcccgtatggagcgtgtggtacgtgaaagaatgtct
atccaagatatttctactgtaacgccacaacaattgattaacatccgtccagttgttgct
tcaatcaaagaattctttggttcttcacaactatcacagttcatggaccaacaaaaccca
ttgagtgagttgacgcacaaacgtcgtctatctgctcttggacccggtggtttgacacgt
gatcgtgccggctatgaagttcgtgacgttcactattctcactacggccgtatgtgtccg
attgaaacacctgagggaccaaacatcggtttgattaacagtttgtcatcttatgcgaag
attaacgagtacggttttatcgaaacaccttaccgtcgtgttgactggagtacgcataaa
gttacagacacaattgattacttaactgctgacgaggaagataacttcgttgttgcacaa
gcaaactcagtcttgaatgaagacggaagttttgcaaatgacatcgttatggctcgttac
atccatgacaacttagaagtacctgtagaacgcgttgactacatggacgtttctccgaaa
caagtagttgcggtagcgacggcatgtattccattcttggaaaacgatgactccaaccgt
gcgttgatgggtgccaacatgcaacgtcaagctgtgcctttgattaatcctaaagcaccg
cttgtcggaacaggtatggaatacgtagctgctcatgactctggagctgcacttctatgt
gaaaatgacggagttgtagaatacctagatgcttctgaaatccgcatacgtcgcgataac
ggaacactggataaataccctgttattaaattccaacgttcaaacgctggatcatgctac
aaccaacgtccaatcgtacgtgttggcgaacgtgtagaaaaaggcgatatcatggctgat
ggtccttctatggaagacggcgaaatggctttaggccaaaacattttagtagccttcatg
acatgggaaggatacaactatgaggatgcggttattatgaacgagcgtcttgtaaaagat
gacgtttatacatccatccatattgaagaatacgaatcagaagcccgtgatacaaaactg
ggacctgaagaaattacacgcgaaatccctaacgttggggaagacgcattgaaagattta
gatgagcgcggcattatccgtattggtgctgaagttcgtgatggcgacatcttagttggt
aaagtgactcctaaaggtgttacagaactttctgcagaagaacgtttgctacacgcaatc
tttggtgaaaaagcgcgtgaagtacgtgatacttcattacgtgtacctcacggtggtggc
ggtatcgttcacgacgttaaagtatttacacgtgaagcgggcgatgagttatctccaggt
gtaaacttgttggtacgtgtttacatcgttcaaaaacgtaaaatcaacgaaggtgacaag
atggccggacgtcacggtaacaagggtgttgtttcgcgcattatgccggaagaagatatg
ccttacctaccagacggcacgcctgttgacatcatgttgaacccactaggggtaccttct
cgtatgaacatcggacaagtattggaattgcacatgggtatggctgctcgcgaattgggc
atttacattgcatctcctgtattcgacggtgccaatgaagaagatgtttggggtactgta
gaagaagcgggtatggcgaaagatgccaaaacaattctttacgatggacgtacgggtgaa
ccatttgataaccgtgtgtctgttgggattatgtactacttgaaactatcccacatggtc
gacgataaattgcatgctcgttcaactggaccatactctcttgttacacaacaaccattg
ggtggtaaagctcaattcggtggacaacgtttcggggaaatggaagtttgggcattggaa
gcttatggagctgcgtatacacttcaagaaatcttgacttacaagtctgatgacgttgtt
ggtcgtgtgaagacatatgaagcgattgttaaaggcgagccaattccaaaaccaggtgta
cctgaatcattccgcgttcttgttaaagagttacaagctcttggtttagacatgaaagtg
ctagacgagaacagagaagaaatcgaactacgcgatatggacgatgaagacgaagtcgtg
aatttcgaacgtttaaacaaacaaactgaagttaaaaaagatgatactgaaggccaaaga
gggtaa
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integrated database retrieval system
