Juglans regia (English walnut): 108979085
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Entry
108979085 CDS
T05245
Name
(RefSeq) polygalacturonase At1g48100
KO
K01213
galacturan 1,4-alpha-galacturonidase [EC:
3.2.1.67
]
Organism
jre
Juglans regia (English walnut)
Pathway
jre00040
Pentose and glucuronate interconversions
jre01100
Metabolic pathways
Module
jre_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
jre00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
108979085
Enzymes [BR:
jre01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.67 galacturonan 1,4-alpha-galacturonidase
108979085
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Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_28
Beta_helix
Pect-lyase_RHGA_epim
GRP
Motif
Other DBs
NCBI-GeneID:
108979085
NCBI-ProteinID:
XP_035540724
UniProt:
A0A6P9DZN8
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Position
13:complement(26692792..26696043)
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AA seq
473 aa
AA seq
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MKRNKNLSIVSLLLLLLLLSILFIASSSTVSVDARKHHRKKAKPHKHPKDKGGNGGSNFP
GPAPAPPPDYGPIPTQSSIFDVLFFGAKGDGVSDDSKALLAAWKAACKIPGATVEIHSEF
KFLIKPITLQGPCMPHLVLQIDGTVLAPSKVGSWPKSGLFQWINFKWLHNFTIQGSGTVD
GQGSNWWSSSTYAWQKKSKHIPDIKPTALRFYSSYDVNVRDIKIIDSPQCHLKFDSSGGV
KISNITISSPADSPNTDGIHLQNTQDVQIQHSNIGCGDDCISIQAGCTNVHVHHINCGPG
HGISLGGLGKDKTIACVSNILVENISVQNTLSAVRIKTWQGGRGSVKNVTFRNVQVSDVK
VPIMIDQFYCDKSFCKNQTKAVEISGVKYDQIIGTYSVKPIHLACSNGVPCTDIGLTDIQ
LNPSPLYQGFQKGLCSNSYGKSRAPLVPSSIDYCLGSVGDAVRRISRSHDFVC
NT seq
1422 nt
NT seq
+upstream
nt +downstream
nt
atgaagagaaacaagaatctatctattgtttccctattactcttgctactcttgctgtcc
atcctcttcatcgcgtcctccagtactgtttcagttgatgcaagaaagcatcacagaaag
aaagccaaacctcataagcatccgaaagataagggtggcaatggcggctcgaattttcct
ggtcctgcacctgcccctcctccagattatggtcctattcccacccagtccagtattttc
gatgttttgttctttggagccaagggtgacggagtttcagacgattctaaggcactccta
gcagcatggaaagctgcctgcaagattcctggggctacagtagaaatccactctgaattc
aagttcctgatcaagcccataactcttcagggtccttgcatgcctcaccttgttcttcag
atagatggaactgtcttagctccttcaaaagttggttcgtggccaaaatccggtcttttt
cagtggataaatttcaaatggctccataactttaccattcaaggctctggtactgttgac
ggccaaggctctaactggtggagtagtagtacgtacgcttggcaaaagaaatcaaagcac
attccagatatcaaacccacagctttgagattctactcaagctatgatgtcaatgttcgc
gacatcaaaatcatagacagtccgcagtgccacctaaaatttgacagctctggtggtgtc
aaaattagcaatataactatttcttcgcctgcggatagcccaaacactgacgggattcac
ctgcaaaacacccaagacgtacaaattcagcactctaatattgggtgtggggatgattgt
atatccatacaagctggttgcaccaatgtccatgttcatcatattaattgtggtcccgga
catggtataagtttaggagggcttggaaaggacaaaactattgcatgcgtctccaatatt
cttgtcgagaatatttcagttcaaaacactctgtcagcagtaaggatcaaaacctggcag
ggaggaagaggatcggtcaagaacgtaacatttagaaacgttcaagtttccgatgttaag
gtcccaataatgatagatcagttttattgtgacaagagtttctgcaagaaccaaacaaag
gcagtggaaatatctggtgttaaatacgatcagataattgggacatattcagtgaaacca
attcatcttgcatgcagcaatggcgttccctgcacagacatcggtctaactgatatacag
ctgaacccctcgccactctatcaaggtttccagaagggtttgtgtagtaattcttatggg
aaatcaagagcccctctagttccttcgagcatagattattgcttaggaagtgtcggagat
gcagtcagaagaatatcaagatcacatgattttgtatgttag
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