Juglans regia (English walnut): 108979502
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Entry
108979502 CDS
T05245
Name
(RefSeq) phytochrome B
KO
K12121
phytochrome B
Organism
jre
Juglans regia (English walnut)
Pathway
jre04712
Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:
jre00001
]
09150 Organismal Systems
09159 Environmental adaptation
04712 Circadian rhythm - plant
108979502
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PHY
PAS
PAS_2
GAF
HisKA
HATPase_c
PAS_4
PAS_9
PAS_8
PAS_3
Glyco_transf_7N
DUF8806
Motif
Other DBs
NCBI-GeneID:
108979502
NCBI-ProteinID:
XP_018805735
UniProt:
A0A2I4DF06
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Position
7:16370023..16377330
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AA seq
1134 aa
AA seq
DB search
MASGSRNVRSQHDNQAQSSNTASNMRPHHAESSIPKAIEQFTVDARLHAVFEQSGESGKS
FDYSQSVRATTQSVPEQQITAYLSRIQRGGHIQPFGCMIAVDEATYSVIAYSENARELLG
LLPQSVPSLEKQEILAVGTDVRTLFMPSSSVLLEKAFGAREITLLNPVWIHSKNSGKPFY
AILHRVDVGIVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVE
SVRELTGYDRVMVYKFHEDEHGEVVAESKRPDLDPYIGLHYPSTDIPQASRFLFKQNRVR
MIVDCNATPVQVVQDEGLMQPLCLVGSTLRAPHGCHAQYMANMGSIASLAMAVIINGNDG
ETVGGRTAMGLWGLVVCHHTSARCIPFPLRYACEFLMQAFGLQLNMELQLASQLLEKHVL
RTQTLLCDMLLRASPTGIITQSPSIMDLVKCDGAALYYQGKYYPLGVTPTEAQIKDIVEW
LLAFHGDSTGLSTDSLADAGYPGAALLGDAVCGMAVAFITKRDFLFWFRSHTAKEIKWGG
AKHHPQDKDDGQRMHPRSSFKAFLEVVKSRSLPWENAEMDAIHSLQLILRDSFKDDEANN
SKAVIHAQLGDLELQGIDELSSVAREMVRLIETATAPIFAVDVDGCINGWNAKVAELTGL
SVEEAMGKSLAHDLVYKESKEAVEKLLSCALRGEEEKNVEIKMRTFGPEHQKKAVFVVVN
ACSSKDYTNNIVGVCFVGQDVTGQKVVMDKFINIQSDYKAIVHSPNPLIPPIFASDDNTC
CSEWNTAMEKLTGWARGDIIGKMLVGEVFGSCCRLKGSDALTKFMIVLHNAIGGQDTDKF
PFSFFDRKGKYVQALLTANKRANMDGQIIGAFCFLQIASPELQQALKVQRQQENKCFARM
KELAYICQEIKNPLSGIRFTNSLLEATELTEDQKQFLETSAACEKQMLKIIKDVDVERIE
DGISSLELEEEEFLLGSVINAVVSQVMILLRERNLQLIRDIPEEIKSLAVYGDQVRIQQV
LADFLLNMVRYAPSPEGWVEIHVHPSLKKTSDGLTLVHTEFRMVCPGEGLPPELVQDMFH
SSRWMTQEGLGLSMCRKILKHMNGEVQYIRESERCYFLVILELPMPQRGSQSVE
NT seq
3405 nt
NT seq
+upstream
nt +downstream
nt
atggcttcaggtagcagaaacgtacgctcacaacacgacaatcaagctcagtcctcgaac
acagcgagcaacatgagaccccaccatgcggagtcttccatccccaaagccattgaacag
tttaccgtcgatgctcgcctccacgcagtctttgaacagtccggcgagtcgggtaagtcc
ttcgactactcccagtccgttagagcaaccacacagtcggttcctgagcaacaaatcaca
gcatacttgtccagaatccaaaggggtggccatatccaaccctttggctgcatgattgcc
gtggacgaagccacctacagcgtaatcgcgtacagcgagaacgcccgcgagttgctgggt
cttttgcctcagtcggtcccgagtctggagaagcaagagattttggcagttgggactgac
gtgaggacgctcttcatgccctcgagctcggttttgctcgagaaggcgtttggagctagg
gaaattaccctgttgaacccggtttggattcattccaagaattcagggaagcccttttat
gcgattttgcatagggtagatgtaggtattgtgattgatttggagcctgcgaggacggag
gatccagctttgtctattgctggggcggtgcagtcacagaagctggcagtgcgggcgatt
tcacagctgcagtcgctgcccggtggggatatcaagctcttgtgtgatactgtggtggag
agcgtgagggagcttactgggtatgatagggtaatggtgtataagtttcatgaggatgag
catggtgaggttgtcgcggagagcaagaggcctgatttggatccgtatattgggttgcat
tatccttccacggatattcctcaggcatcaaggtttttatttaagcagaacagggttagg
atgattgtggattgcaatgccacgcctgttcaggtggttcaggatgaagggcttatgcag
cctttgtgcttggttggttccacacttcgtgctcctcatggttgtcatgctcagtatatg
gccaatatgggatcaattgcctcgttagcaatggcagttatcatcaatgggaatgatggg
gaaactgttggtgggaggactgcaatggggttgtggggcttggttgtttgccatcatact
tcagctcgctgcattccattccctctccgctatgcttgtgagttcctaatgcaggctttt
ggacttcaattgaatatggagttgcaattggcatcacaattgttggagaagcatgtttta
aggactcagaccctcttgtgtgatatgcttcttcgtgcctcacccactggaattattact
caaagccctagtattatggaccttgtgaagtgtgatggtgccgccctctactatcaaggg
aagtactatccactaggtgtgaccccgactgaggcccagatcaaggacatagtggagtgg
ttgttggctttccatggagattccacaggtttaagcacagacagtttggctgatgctggg
taccctggagcagccttgcttggagatgcagtttgtgggatggctgttgcttttatcact
aaaagggattttctattctggtttcgttcccacactgcaaaagagatcaaatggggtggt
gcaaagcatcaccctcaggacaaggatgatgggcagaggatgcatccacgttcatcattc
aaggcatttttggaagtggtaaaaagccgcagcttgccatgggagaatgcagaaatggac
gcaatccactctttgcagctaattctgcgagactcattcaaagatgatgaggcaaacaat
tctaaggctgttatacatgcccagcttggggatctagagttgcaagggatagatgagctt
agctcagtggcgagagaaatggtcaggttaatagagactgcaactgctcctatatttgct
gtagatgttgatggctgtataaatgggtggaatgcaaaggttgcagagttgacagggctc
tcagttgaagaagctatggggaagtctttggctcatgatcttgtttataaagaatctaaa
gaagcagtagagaagcttctttcttgcgctttaagaggtgaagaagaaaagaatgtagag
ataaaaatgaggacatttggccctgagcatcagaagaaggctgtatttgtggtggtcaat
gcttgctccagcaaggattacacaaataacatagttggagtttgttttgtcggtcaagat
gttactggtcaaaaagtggtgatggacaagttcatcaacattcaaagtgattataaggct
attgttcacagtcccaatcctttgatccctcccatatttgcttcagatgataacacatgt
tgctcagagtggaacactgccatggaaaaactcactgggtgggcccgaggggacataatt
ggaaaaatgttggttggtgaggtttttggcagttgctgtcgactcaagggttccgatgct
ttgacaaaattcatgattgtcttgcataatgcaattggagggcaggacacagacaagttt
ccattttccttctttgatcgaaaggggaaatatgtacaagctctcttgacagcaaacaag
agggcaaatatggatggccagattattggagccttctgtttcttgcagatagctagtcct
gaattgcagcaagcccttaaagttcagcggcaacaagagaataaatgctttgcaagaatg
aaagagttagcttacatttgccaggaaataaagaatcctttaagtggcattcgctttaca
aactctcttttggaggctacagaattgactgaagatcaaaagcagtttcttgagactagt
gctgcttgtgagaagcagatgttgaagattataaaggacgttgatgtggagagaattgaa
gatggaatcagttcattggaacttgaggaggaggaatttttactcgggagtgtcataaat
gctgttgttagccaagtaatgatattgctgagggaaagaaatttacaattgattagggat
attccggaggaaatcaaatcattggctgtttatggtgatcaagtgaggatacagcaggtc
cttgctgatttcttgctaaatatggtgcgttatgcaccatctccagaaggttgggttgag
attcacgttcatccaagcttgaagaaaacttctgatggattgactcttgtacatacagaa
ttcaggatggtatgccctggcgaaggtcttcctcctgaattggttcaggacatgttccat
agcagtcgatggatgactcaggaaggccttgggctgagcatgtgcaggaagattttaaag
cacatgaatggtgaggtccaatatatcagagagtctgaaagatgctatttcttggttatt
cttgaacttcccatgcctcagagaggctcacaaagtgtcgagtag
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