Juglans regia (English walnut): 108979935
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Entry
108979935 CDS
T05245
Name
(RefSeq) E3 ubiquitin-protein ligase RDUF1-like
KO
K11982
E3 ubiquitin-protein ligase RNF115/126 [EC:
2.3.2.27
]
Organism
jre
Juglans regia (English walnut)
Brite
KEGG Orthology (KO) [BR:
jre00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
jre04131
]
108979935
04121 Ubiquitin system [BR:
jre04121
]
108979935
Enzymes [BR:
jre01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
108979935
Membrane trafficking [BR:
jre04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
108979935
Ubiquitin system [BR:
jre04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
108979935
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF1117
Zn_ribbon_19
zf-RING_2
zf-rbx1
zf-C3HC4_2
zf-C3HC4
zf-RING_UBOX
zf-RING_11
zf-RING_5
zf-C3HC4_3
zf-ANAPC11
zf-RING_16
Prok-RING_4
zf-HC5HC2H_2
CxC4
Rad50_zn_hook
FAR1_N
zf_RING_Vps8
DUF1272
Ribosomal_aS21
zf-HC5HC2H
Motif
Other DBs
NCBI-GeneID:
108979935
NCBI-ProteinID:
XP_035544544
UniProt:
A0A6P9EAU1
LinkDB
All DBs
Position
3:complement(30863354..30865625)
Genome browser
AA seq
374 aa
AA seq
DB search
MASMGSSYWCYRCNRFILVRVRANDTFLCPDCGGGFVEEIRTPTRSPLHRFPAASVYIDD
PPIPEHNAIPRLQRSRRNGGDRSPFNPVIVLRGPVDGGGRNEPERGNFELYYDDGAGSGL
RPLPTSMSEFLMGSGFDRLLDQLAQLEVNGVGRLEHPPASKAAIESMPIIKIVASHVSTE
SHCAVCKEQFELDSEAREMPCKHIYHSDCILPWLSMRNSCPVCRHELPTDVRVSGSGRNS
PEPDGARDEEAVGLTIWRLPGGGFAVGRFTGGIRAAERELPVVYTEVDGGFNTGGVPRRI
SWETSVRSSRETGGLRRAFRSFLSFFGRLRPASSSSRSSSEPGLTRRRSGSNAVFNRSWR
RRRGHPVALDDSTR
NT seq
1125 nt
NT seq
+upstream
nt +downstream
nt
atggcttcgatgggctcctcctactggtgctacagatgcaaccgattcatactggttcgg
gtccgtgccaatgacaccttcctctgccccgactgcggtggtggatttgtcgaagaaatc
cggaccccgactcgatctccgctccaccggttccccgctgcctcagtgtacatcgatgac
ccgcccattcccgaacacaacgccattccgaggctccagcgtagccgtaggaatggtggg
gatcgctcgcctttcaaccccgtcatcgtcctccgtgggccggtagatggaggcggccga
aatgaacccgaaagagggaattttgagctctattacgacgatggagctggttcggggctc
cggcctctacccactagcatgtcggagttcttgatgggctccggattcgaccgcctcctc
gaccaattggcgcagttggaggtaaatggagtcgggaggttagagcacccgcccgcgtca
aaggctgctattgagtcgatgcctattatcaagatcgtcgcgagccacgtttcgacggag
tcgcattgcgcggtctgtaaggagcaattcgagctcgattcggaggcacgggagatgcct
tgtaagcacatttaccattcggattgtatactaccgtggctctccatgaggaattcttgt
ccggtgtgtcggcacgagttgcccacggatgtgcgtgtgagtgggagcggtaggaattca
ccggagcctgatggagctcgagacgaagaggccgtgggattgacgatttggagacttcct
ggtggtgggtttgccgttggtaggtttactggggggataagagccgcggagcgtgagcta
cctgttgtttacacggaggtggatggtgggttcaacactggtggcgttcccagaaggatt
tcgtgggagacgagtgtgagaagctcaagggaaaccggtggactgcgacgtgcgtttcgt
agcttcttatcatttttcggtcggcttagacctgcttcatcatcctctcgttcgagttct
gaaccggggctaactcgtaggaggagtggctctaatgcggtgtttaatcgttcgtggagg
aggcgccgcggccatcctgtggctttggatgattccactcggtga
DBGET
integrated database retrieval system
