Juglans regia (English walnut): 108979954
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Entry
108979954 CDS
T05245
Name
(RefSeq) phenylalanine--tRNA ligase beta subunit, cytoplasmic-like
KO
K01890
phenylalanyl-tRNA synthetase beta chain [EC:
6.1.1.20
]
Organism
jre
Juglans regia (English walnut)
Pathway
jre00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
jre00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
108979954
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
jre01007
]
108979954
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
jre03016
]
108979954
Enzymes [BR:
jre01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.20 phenylalanine---tRNA ligase
108979954
Amino acid related enzymes [BR:
jre01007
]
Aminoacyl-tRNA synthetase
Class II (U)
108979954
Transfer RNA biogenesis [BR:
jre03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
108979954
Prokaryotic type
108979954
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_synthFbeta
PhetRS_B1
B5
B3_4
EAD7
tRNA-synt_2d
Motif
Other DBs
NCBI-GeneID:
108979954
NCBI-ProteinID:
XP_018806301
UniProt:
A0A2I4DGM4
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Position
6:27744135..27757865
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AA seq
602 aa
AA seq
DB search
MPTISVGRDRLFAAIGQTYTQEEFEDLCFRFGIELDDVTTEKAIIRKEKHLEEEEDGDDE
EVIYKIEVPANRYDLLCLEGIAQALRIFNGLQEMPTYKVVNISRKSMIKMHVKPETSSIR
PYVLCAVLRGIKFDEVTYNSFIDLQDKLHQNICRRRTLVAIGTHDLDTLHGPFTYEALPP
SSINFVPLKQEKHFRADELMGFYKSDLKLKKFLHIIENSPVFPVIYDYKRTVLSLPPIIN
GAHSAITLKTKNVFIECTATDLTKAKIVLNTVVTTFSEYCERKFEIEPVEVIYSNGKSVV
YPDLSFYNMEVPLSYITGAIGVPLEADEVTSLLNRMQLCAEQSVSGDSNSNITVSVPPTR
NDVLHPCDVMEDVAIAYGYNNVKDITIAKGYNVSKGRAVSLKPLRLEEFSHLIRLEMAMC
GFTEVMSFILCSLNDNFAMLNHEGDRSNAVIIENPRSSENETARTSLMPGILKTVGQNKG
HPKPIKIFEVGDIVLLDETTDVGATNRRQLAALYCGATAGYEIIHGLVERIMLVIGLVPP
DDNTTFYLKPSDDPEFVMGTQASIIYKGKRIGTSGIVHPEVLNKFDIPDPCAYFELSIQC
FF
NT seq
1809 nt
NT seq
+upstream
nt +downstream
nt
atgcctactatcagcgtgggaagggatcgtctcttcgcagcgatcgggcaaacttacact
caggaagagttcgaagacctttgcttcaggttcggcatcgagctcgacgacgttacaacg
gagaaagcgattattagaaaggaaaagcatttggaagaggaggaagatggggacgatgaa
gaagttatctacaagattgaagtccctgccaatagatatgatttactttgccttgaaggg
attgctcaagcccttcgaatcttcaatgggctacaggagatgccgacatataaagtggtt
aatattagtagaaaatcaatgattaaaatgcacgtgaaaccagagacgtcttcaattcgt
ccctatgttctttgtgctgttttaagaggtataaagtttgatgaagtaacatataacagc
tttattgatctccaagataagctccatcagaacatttgtcggcgaagaaccctagttgca
attgggacccatgacttggatacattacatggccctttcacatatgaggccttgccacct
tcaagtataaattttgtgcctctgaaacaggagaagcatttcagagctgatgagctgatg
gggttttacaagtcagatttgaaactaaagaaattcttgcatataattgagaactcacca
gtgttccctgtgatatatgactacaaaagaactgttttgtctttacccccaattatcaat
ggtgcacattcagcaatcactcttaagacgaagaatgtgttcattgaatgcactgctacc
gatctgacaaaagccaagatagttttaaacacagtggtgacgaccttctcagaatattgt
gaaagaaagtttgaaattgagccagttgaggtgatatattctaatgggaagtcagttgtc
tatcctgatttatctttctacaatatggaagttcctctgtcttatattactggtgcaatt
ggagtccccttggaggctgacgaggtcactagtttgttaaatcggatgcaattgtgtgct
gagcagtctgtgtcgggtgatagtaactccaatattactgtatctgtacctccaactaga
aatgatgttcttcacccatgtgatgttatggaggatgttgccattgcttatggctacaat
aatgttaaggatattacgattgctaaggggtacaatgtttcaaagggaagggctgtgtct
ttgaagccactgcgcttggaagagtttagtcatcttatcagattagagatggcaatgtgt
gggtttacagaggtcatgtcatttatcttgtgctcgcttaatgacaattttgcaatgtta
aatcatgaaggagacagatcaaatgcagtgatcattgaaaatcctcgttcctctgaaaat
gagactgctcgtaccagtcttatgcctggtatattgaaaactgttggacagaacaaaggc
catccaaagcccataaagatttttgaagtgggtgacatagtgctgttggatgagactaca
gatgtaggagcaacaaatcgtcgccagcttgctgctctatattgtggtgctactgcagga
tatgagataattcatggcttggtggaaagaatcatgctagtaattgggctagttccacct
gatgacaatacaacattctatctaaagccttcagatgatcctgagtttgttatgggtacc
caagctagtatcatttataaagggaagcgaataggaacatccggaatcgtgcaccctgag
gtcttgaacaagtttgacatccctgatccttgtgcctattttgaactcagcattcagtgc
tttttttag
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