Juglans regia (English walnut): 108980472
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Entry
108980472 CDS
T05245
Name
(RefSeq) autophagy-related protein 16 isoform X1
KO
K17890
autophagy-related protein 16-1
Organism
jre
Juglans regia (English walnut)
Pathway
jre04136
Autophagy - other
Brite
KEGG Orthology (KO) [BR:
jre00001
]
09140 Cellular Processes
09141 Transport and catabolism
04136 Autophagy - other
108980472
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
jre04131
]
108980472
03029 Mitochondrial biogenesis [BR:
jre03029
]
108980472
Membrane trafficking [BR:
jre04131
]
Autophagy
Autophagosome formation proteins
Atg12 conjugation proteins
108980472
Others
Specific organelles associated proteins
Auto phagosome
108980472
Mitochondrial biogenesis [BR:
jre03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
108980472
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
WD40_CDC20-Fz
WD40
WD40_WDHD1_1st
EIF3I
Beta-prop_EML_2
Beta-prop_TEP1_2nd
WDR55
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_EML
ATG16
WDR90_beta-prop_4th
ANAPC4_WD40
Beta-prop_TEP1_C
Beta-prop_WDR75_1st
WD40_MABP1-WDR62_1st
Beta-prop_RIG_2nd
Beta-prop_SCAP
NBCH_WD40
Beta-prop_NWD2_C
Beta-prop_IFT122_1st
Beta-prop_IFT140_1st
Beta-prop_HPS5
Beta-prop_WDR35_TULP_N
Beta-prop_SPT8
Beta-prop_VPS8
Beta-prop_WDR19_1st
Beta-prop_DCAF4
Ge1_WD40
WD40_RFWD3
WDR54
Beta-prop_RIG_1st
Beta-prop_EIPR1
Beta-prop_Nup120_160
Cytochrom_D1
PEP5_VPS11_N
Beta-prop_Vps41
YabA
Motif
Other DBs
NCBI-GeneID:
108980472
NCBI-ProteinID:
XP_035543374
UniProt:
A0A6P9E7C0
LinkDB
All DBs
Position
2:complement(1706458..1711838)
Genome browser
AA seq
528 aa
AA seq
DB search
MEFSVCFPMVEGMTMLNLSRSQDQIAREAIKHALRSLRKRHLLEEGAHSPAFIALTRPIA
SQGSEWKEKAENLELELQQCYKAQSRLSEQLVVEVAESRASKASLQEKESAVSNLQAELT
QTRDECSQLKADLEEKIKALELLICENHQLKAQLEEITIKAKNAEAENKMLVDRWMLQKM
QDAERLNEANALYDEMVNRLKASGLENLARQQVDGVVRRNEDGAEFFVESTVPSLCKQRI
HAHEGGCASILFEYNSAKLISGGQDRSIKMWDASTGTLSHTLYGCLGSVLDLTITHDNRS
VIAASSSNNLFVWDVNSGRVRHTLTGHTDKVCAVDVSKISSRHVVSAAYDRTIKVWDLNK
GYCINTIIFPSNCNALCFSMDGHTICSGHVDGNLRLWDIHSGKLLSEVAAHSLAVTSISL
SRNGNVVLTSGRDNLHNLFDMRSLEVCGTLRAMGNRVASNWSRSCISPDDNYVAAGSADG
AVYIWSISKADIVSTLREHTSPVLCCSWSGIGKPLASADKNGIICTWS
NT seq
1587 nt
NT seq
+upstream
nt +downstream
nt
atggagttctccgtttgttttccgatggtagagggaatgactatgctgaatctttccagg
tcacaggaccagatagcgagggaggcgataaagcacgctttgaggtctctacggaagcgg
catttgctcgaagaaggtgctcattctccggctttcatcgctcttaccagaccaatcgcc
tctcagggctcagaatggaaagagaaagcagaaaatctggagttggaactccagcaatgt
tacaaagctcaatctcggttgtccgagcaacttgtggtcgaagtagctgaatcccgagct
tcaaaagcctcacttcaagagaaagaatcagcagtctcaaatctccaggcagagttgact
caaacaagggatgaatgttctcaattgaaggcagacttggaagaaaagataaaagcttta
gaattgcttatatgtgagaaccatcaactcaaagctcaactggaagagataactattaaa
gctaagaatgccgaggctgaaaataagatgttagttgatcgctggatgctgcagaagatg
caggatgctgaacggctcaatgaggcaaatgcactttatgacgaaatggttaatcggctc
aaggctagtggtttagaaaatcttgctaggcagcaggttgatggtgtggttcgccgaaat
gaagatggtgccgaattctttgtggagtcaactgttccctccctatgcaagcagaggata
catgcccatgaaggtggttgtgcctccatattgttcgagtacaattctgccaaactgatt
agtggaggacaggaccgatcaatcaagatgtgggacgcgagcactggaacattaagtcat
actctttatggttgccttggctctgttctcgatcttaccattacccatgataatagatct
gtcattgcagcaagcagctcaaacaacttatttgtatgggatgtcaattcaggccgtgta
cgccatactcttactggtcacacagataaagtttgtgctgtagatgtaagcaaaatctca
agtcgtcatgttgtcagtgctgcttacgatcgtaccataaaagtttgggacttgaataag
ggttactgcatcaacacaatcattttccccagcaactgtaatgctctttgcttcagcatg
gacggacataccatttgttctggtcatgttgatgggaatcttcggttatgggacattcac
tcaggaaagctacttagtgaagttgccgcgcattcacttgctgttacatctatctctttg
tctcgaaatggaaatgtagtattgactagtggaagggacaacttgcataatttgtttgat
atgcgatctctagaagtttgtggcacacttagagcaatgggaaacagagtggcatcgaat
tggagccgatcctgtatcagtccagatgacaactatgtagctgctggatccgccgatgga
gctgtttacatttggtccatttctaaagccgatattgtcagcactctgagggaacacact
tctcctgtgctgtgttgctcgtggagtgggatcgggaaacctctagcctcagcagacaag
aatggaattatttgtacctggtcatga
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integrated database retrieval system
