Juglans regia (English walnut): 108980646
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Entry
108980646 CDS
T05245
Name
(RefSeq) CCR4-NOT transcription complex subunit 9-like isoform X1
KO
K12606
CCR4-NOT transcription complex subunit 9
Organism
jre
Juglans regia (English walnut)
Pathway
jre03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
jre00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
108980646
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
jre03019
]
108980646
Messenger RNA biogenesis [BR:
jre03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
108980646
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rcd1
PP4R3
Motif
Other DBs
NCBI-GeneID:
108980646
NCBI-ProteinID:
XP_018807189
UniProt:
A0A2I4DJ59
A0A833XZR9
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Position
1:complement(17312947..17318528)
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AA seq
318 aa
AA seq
DB search
MANLPESLFFSDPRPSSSSFGAGPSTSGANTYKTSDHDQGDPSRAKILHLILDLNDYRTR
ERALYLLDKSRGSIREDLPLLLWNSFGTIYSLLKEILDVYRLISAQNLTQRASNRVCCAL
ALFQCVASHRDTRMRFIKARIPSYLFPLLNIENKERPYEHLRLTSLGVIGSLVKAGDAEA
VSYLLENEIFIYCLRCMEVGGELSKTVATYIVQRIIINEEGLRYCCAFAQRFYTLSRALG
NMLECRAELPGKRLLKYIIYCYLRLSHNPRARDGLRTCLPASLRDPDIINLLRDDPTTVG
FLQQLLYNVSMGHQYTVI
NT seq
957 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaccttccagaatcgctgtttttctcagatccaagaccgtcatcgtcatcgttc
ggagcgggtcctagcacgtccggagccaacacttacaaaacttctgatcatgatcaaggt
gacccctcaagagccaaaatattgcatttgattcttgaccttaatgattatcgtacacga
gagcgcgctctttacctcctagacaagagtaggggatcaattcgtgaagatttacctcta
ttgttatggaattctttcggtacgatatactcgctcttaaaggaaatactcgatgtatac
cgcttaatatcagcccaaaacctaacacaaagagcatcgaatcgtgtatgctgtgctctt
gctctatttcagtgcgtagcttctcaccgagatacaaggatgcggtttatcaaggctaga
attccatcgtatctattccctctacttaacattgagaacaaggaaaggccatatgaacat
ctaaggcttaccagcttaggtgttatcggttccttagtgaaggctggtgatgcagaagct
gttagttaccttctagaaaatgaaatatttatttattgccttcgctgcatggaggtgggc
ggtgaattgtcaaaaacagttgccacatatattgttcaaagaattattataaacgaggag
gggttgaggtattgctgtgcttttgcacaacggttttatactttgagtcgtgctttgggg
aacatgttggaatgtcgtgctgagctacccggaaaacggctgctaaaatatattatctat
tgttatctgaggctctcacataatccaagggcacgtgatggtttgagaacttgccttccc
gccagcttaagagatcccgacatcatcaacctcctccgtgatgacccaacaaccgtcggg
tttctgcaacaattactttacaacgtctccatgggacaccaatatactgttatataa
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