Juglans regia (English walnut): 108980740
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Entry
108980740 CDS
T05245
Name
(RefSeq) eukaryotic initiation factor 4A-15-like
KO
K03257
translation initiation factor 4A
Organism
jre
Juglans regia (English walnut)
Brite
KEGG Orthology (KO) [BR:
jre00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
jre03019
]
108980740
03012 Translation factors [BR:
jre03012
]
108980740
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
jre04147
]
108980740
Messenger RNA biogenesis [BR:
jre03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
108980740
mRNA cycle factors
Stress granule specific factors
108980740
Translation factors [BR:
jre03012
]
Eukaryotic type
Initiation factors
eIF-4
108980740
Exosome [BR:
jre04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
108980740
Exosomal proteins of bladder cancer cells
108980740
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_22
DUF8050
DUF2780
Motif
Other DBs
NCBI-GeneID:
108980740
NCBI-ProteinID:
XP_018807285
UniProt:
A0A2I4DJG1
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Position
6:4665685..4670083
Genome browser
AA seq
413 aa
AA seq
DB search
MSGAAPEGSQFDARQFDAKMSELLGADGQDFFTSYDEVYESFDVMGLQENLLRGIYAYGF
EKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVECQALVLAPTREL
AQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILSAGVHVVVGTPGRVFDMLRRQSLRP
DYIRMFVLDEADEMLSRGFKDQIYDIFQLLPPKIQVGVFSATMPPEALEITRKFMNKPVR
ILVKRDELTLEGIKQFHVNVDKEEWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKMR
GRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQP
ENYLHRIGRSGRFGRKGVAINFVTADDERMLFDIQRFYNVVIEELPANVADLL
NT seq
1242 nt
NT seq
+upstream
nt +downstream
nt
atgtctggtgcggcaccggagggttcccaatttgatgcccgtcaatttgatgctaaaatg
agcgagttacttggagcagatgggcaagatttcttcacatcatatgatgaggtttatgag
agttttgatgtgatgggattgcaagagaacctccttagaggaatctatgcttatggtttt
gagaagccctctgcaattcagcaaagggggattgttcctttctgtaaaggacttgatgtg
attcaacaagcacagtctggaactgggaaaactgctactttttgctccggtatcttgcag
cagcttgattatggcttggtcgaatgccaggccttggttcttgctcccactagggagctt
gcacaacagattgagaaggtcatgcgggcccttggtgactatttgggtgtcaaggttcat
gcctgtgttggtggaacgagtgttcgtgaggatcaacgaattctttctgctggggtccat
gttgttgttggtacccctggtcgtgtctttgacatgcttcgcaggcaatcactgcgccct
gattacattaggatgtttgtgttagacgaagcggatgaaatgctttcacgaggcttcaag
gatcagatctatgatatcttccagctgctgccacctaaaattcaagttggggttttctct
gccacaatgccgcctgaggctcttgagattaccaggaaattcatgaataaacctgtaagg
attctggttaaacgtgatgagctcacccttgagggtattaagcaattccatgttaatgta
gacaaggaggaatggaagcttgagacactttgtgatctttatgaaaccttggcaatcacc
caaagtgttatctttgtgaacacaaggcgcaaggttgattggctgacagacaagatgcgc
ggccgtgaccatacagtttctgccacccacggagacatggatcaaaatacaagagacatc
atcatgcgggaattcaggtctgggtcctctcgtgttctcatcactactgatctcttggcc
aggggtattgatgtccagcaagtctctctcgtgatcaattatgatcttcctactcagcca
gagaactacctccatcgaattggtcgtagtgggcggtttggaaggaagggtgttgccatc
aattttgtgaccgcagatgatgagaggatgctctttgacatccagaggttctacaatgtg
gtgattgaggagctgccagcaaatgttgccgatctcctttga
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