Juglans regia (English walnut): 108980906
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Entry
108980906 CDS
T05245
Name
(RefSeq) probable pectate lyase 5
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
jre
Juglans regia (English walnut)
Pathway
jre00040
Pentose and glucuronate interconversions
jre01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
jre00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
108980906
Enzymes [BR:
jre01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
108980906
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Gene cluster
GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
108980906
NCBI-ProteinID:
XP_018807501
UniProt:
A0A2I4DK21
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Position
9:complement(13352942..13354974)
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AA seq
409 aa
AA seq
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MAIPPPPLFLITFLFSVLLPTLISSSPVQDPELVVKEVQRSINNASKARRNLGYLSCGTG
NPIDDCWRCDPNWEKNRQRLADCAIGFGRNAIGGKNGKIYVVTDSSDKDAVNPKPGTLRY
AVVQDEPLWIIFARDMVIKLKEELIMNSFKTIDGRGASVHIAGGPCITVQFVSNIIIHGI
HLHDCKQGGNAMVRSSPRHYGWRTVSDGDGVSIFGGSHVWVDHCSLSNCDDGLIDAIHGS
TAITISNNYMTHHDKVMLLGHSDSYTQDKGMQVTIAFNHFGEGLVQRMPRCRLGYFHVVN
NDYTHWEMYAIGGSASPTINSQGNRFAAPDDRFSKEVTKHEDAPESNWKHWNWRSEGDLL
LNGAFFTASGAGASSSYAKASSLGARPSALVGTITTSAGALNCRKGSHC
NT seq
1230 nt
NT seq
+upstream
nt +downstream
nt
atggcaatccctcctcctccgctctttctcatcaccttcctcttctctgtcctgctccca
accctcatttcctcctccccagttcaggatcctgagctagtagtaaaagaagtacaaagg
agcatcaacaatgcgtctaaggctaggaggaacttgggttatctttcttgcgggacgggc
aacccaatcgacgattgctggcggtgtgaccccaattgggagaagaaccgccagaggctg
gctgattgtgctattgggtttggcagaaacgccattggaggaaaaaatggcaagatttac
gtggtcacagacagcagcgataaagatgcagtgaacccaaagccggggactctgagatat
gctgtggttcaagatgagccattgtggattatctttgcacgagatatggtgataaagttg
aaggaagagctgattatgaattcgtttaagaccattgatgggaggggagcgagtgtgcac
attgctgggggtccatgcatcactgttcagtttgtgagtaatattatcattcatggcata
cacctacatgactgtaagcaagggggaaatgctatggtgaggagctccccacggcactat
gggtggaggacagtatcggacggtgatggggtgtccatctttggtgggagccacgtatgg
gtggaccattgttcactgtcaaactgtgatgatgggttgattgatgcaattcatggttcc
acagccattaccatctcaaacaattacatgacacaccatgacaaggtgatgttgttgggt
cacagcgattcctacactcaggacaagggcatgcaggtgaccatcgccttcaatcacttt
ggggaggggcttgtccaaagaatgccaagatgtaggctagggtacttccatgtggtgaac
aatgactacactcactgggaaatgtatgccattggagggagtgcttcccctaccattaat
agccaagggaacagatttgctgcaccagatgacagattcagcaaagaggtgaccaaacat
gaggatgctccagaaagtaattggaagcactggaattggaggtctgaaggagacctattg
ctgaatggtgcattttttacagcatcaggtgctggggcttcatcaagctatgccaaggct
tcgagcttaggagcaagaccgtctgctcttgttggcacaattacaacgagtgcaggtgca
ctaaattgcaggaagggttctcattgctga
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