Juglans regia (English walnut): 108981368
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Entry
108981368 CDS
T05245
Name
(RefSeq) F-box protein SKP2B-like isoform X1
KO
K03875
F-box and leucine-rich repeat protein 1 (S-phase kinase-associated protein 2)
Organism
jre
Juglans regia (English walnut)
Pathway
jre04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
jre00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
108981368
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
jre04121
]
108981368
Ubiquitin system [BR:
jre04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
108981368
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GFIT
Motif
Pfam:
DUF7885
LRR_6
LRR_4
F-box-like
F-box
LRR_At1g61320_AtMIF1
Motif
Other DBs
NCBI-GeneID:
108981368
NCBI-ProteinID:
XP_018808030
UniProt:
A0A2I4DLK7
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Position
6:complement(2704633..2708773)
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AA seq
373 aa
AA seq
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MVGKDNLRTEDLNLCFEKLMMLSGNGIGTGVKMEGGVITGWKDIPMELLLQIVSLVDDQT
VIMASGVCRGWRDAISLGLTHLSLSWCNKNMNNLVLSLAPKFTKLQSLILRQDKTQLEDD
AVQTIANCCHDLQVLDLSKSFKLSDRSLFALAHGCRNLSKLNISGCSAFSDSALAYLASF
CQNLKVLNLCGCVQAASDIALQAIGRYCSQLQSLNLGWCDNVSDVGVMCLAYGCPDLRTL
DLCGCVRITDDSVIALANKCLHLRSLGLYYCQNITDTAMYSLAHSRVKKKTPIWKPMKEM
NDEDGLRTLNISQCTALTPPAVQAVCDTFPALHTCSGRHSLIMSGCLNLMSVHCVCAVHA
HRTASNIPHQLIE
NT seq
1122 nt
NT seq
+upstream
nt +downstream
nt
atggtgggtaaagacaacttgaggacagaggacttgaacttgtgctttgagaagcttatg
atgctttctggaaatggaattggtacaggagtaaaaatggaaggtggtgtcattactggg
tggaaggatattcccatggagctgttgttgcaaattgtttctcttgtcgacgatcagaca
gtgatcatggcttctggagtgtgtcgtgggtggagagatgctattagcttgggccttacc
catctctctctctcatggtgcaacaagaacatgaataacttggtcctatctcttgctcca
aagttcacaaaattgcagagtctgatactacgccaagataaaacacagcttgaggatgat
gctgttcaaactattgcaaactgctgtcatgatctgcaggtcctggacctcagcaaaagc
ttcaagcttagcgaccgctccctgtttgccctggctcatgggtgtcgtaatctttcaaaa
ctaaatatcagtggatgttcagcattcagtgatagtgctcttgcatatctggcaagtttt
tgccaaaatctaaaggttttaaatctttgtggatgcgtccaagctgcatccgacattgcg
ttacaggctattggacgctactgcagtcagttacagtctttaaatctaggatggtgtgat
aatgtaagtgatgtcggagtaatgtgtttagcatatggatgccctgatctcagaaccctt
gatttgtgtggctgcgtccgtataacagatgatagtgtgattgctcttgcaaacaaatgt
cttcatttgagatctcttggcctgtactactgtcagaacatcacagacacagcaatgtac
tctttggcccacagccgagtgaagaaaaagacaccaatatggaaacctatgaaagaaatg
aatgatgaagatgggcttaggactctcaacatcagccagtgcacggcactcactccccct
gctgttcaggcagtgtgcgatacctttcctgctctccacacttgctcaggaaggcattca
cttatcatgagcggctgtttgaacttaatgtctgtgcattgtgtctgtgctgtccatgca
caccgcacagccagcaacattcctcaccagctcattgaatga
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