Juglans regia (English walnut): 108982294
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Entry
108982294 CDS
T05245
Name
(RefSeq) protein BREAST CANCER SUSCEPTIBILITY 2 homolog B-like
KO
K08775
breast cancer 2 susceptibility protein
Organism
jre
Juglans regia (English walnut)
Pathway
jre03440
Homologous recombination
jre03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
jre00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
108982294
03460 Fanconi anemia pathway
108982294
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
jre04121
]
108982294
03036 Chromosome and associated proteins [BR:
jre03036
]
108982294
03400 DNA repair and recombination proteins [BR:
jre03400
]
108982294
Ubiquitin system [BR:
jre04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
108982294
Chromosome and associated proteins [BR:
jre03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Other centrosome duplication proteins
108982294
DNA repair and recombination proteins [BR:
jre03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA complex
108982294
FA (Fanconi anemia) pathway
Downstream FA components
108982294
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRCA-2_OB1
BRCA2
BRCA-2_helical
Tower
Motif
Other DBs
NCBI-GeneID:
108982294
NCBI-ProteinID:
XP_018809166
UniProt:
A0A2I4DPU0
A0A834D4Y7
LinkDB
All DBs
Position
3:complement(33444653..33452216)
Genome browser
AA seq
1113 aa
AA seq
DB search
MSTWQIFSDAGNSFRWETSDQNPQIEPEDDSDSHYTSSSLPSMSDLLLQGCSKLLDNRGE
SAGSFPAFQTGLGKLVTVKQSSIAKALSVLGEDTGQVLARDNGCDSSNSLFQTGSGKTVN
ISSDGLVRAKTLLGLEEDTDNCVSQGYQHSAKPNTPFGWQGLSPLEMGEGVNNSVIKDVR
SVPRHSFDSKIGSAGSRLKNQGNPNIMLPEMHSSALKPPPIKFHTAGGRSLSVSGDALKR
AMSLLGEPELGTFLNEGDADDSIFSLSKETRLTDTSSNEGNDPRTPFSHEKMENCKNMPN
IFISPLRSSSYQGRLPVKSEDIIGGNNLIKEFDAVHHGNACRLNSNASSLEKRLSDGQGG
SDTVAKSSLANGVGSRINSFGRSPARPLVDISNTIGTACTNNGQMTSVKRILGKSSISPF
KKPRSSKFSTPLNSTVPFVSNGLSTSTSAPSCCKTGISSRYPFKIPRMYIKEFIKVPPSN
QNMLEVLSDQIRCIKSTNAEKYTFHDETGLNCIGPEAFFHMLARTGALEQYASKEWVINH
YKWIVWKLACYERYNPTKAAGKFVTASNVLEELKYRYEREVNHGHRSAIKRILEGDASPS
LMMVLCISAVCSICDLKNDTSSVAVTGAQNSNATKVELTDGWYAMDAVLDAQLSKQLAAG
KLFVGQKLRIWGAGLCGWVGPVSPLEVSRTVSLLLHINGTYRTHWADRLGFCKGVGAPLA
FRCIKSNGGPVPLTLVGVRRIYPLLYKERLSNGGSIVRSERMESRMVQLYNQRRSTVVEG
IVSEFQRGTKDSNNYNDTDSEEGAKILRILETAAEPEVLMAEMSPEQLTSFATYQAKLEA
TKQSDMEKAIKKAFEGAGLGEREVTPFMRVRVVGLTNKIYHRKDSPKEGLITIWNPTDKQ
QHELAEGQAYSVAGLVPINSDANTLYLQARGSTTKWQPLSSQVTEHFIRFHSPRKSVLLS
GLGEVPLSSEFDIAAVVVYVGEVFADPHQRKQWVFVTDGSISESRAEELSNSLLAISFCS
SDVDDSSFAPVNSNLAGSTIGFCNLIKRAKDQMNHLWVAEATENSIYFLNLDSPPCSHLK
NAAALTQKWARMSSLTLDKLREKVLFIIGDCKG
NT seq
3342 nt
NT seq
+upstream
nt +downstream
nt
atgtctacctggcagatattctccgatgccggcaatagcttccggtgggaaacctccgac
caaaatccccaaatagaacccgaagatgattctgacagtcactacactagctctagtctc
ccttccatgtccgatctcctgctccaagggtgttctaagcttctggataatcgcggtgaa
agtgcggggagctttccagcattccaaaccggattgggaaaattggtcaccgtgaaacag
tcttcgatagcgaaagcattatctgttcttggcgaagatacaggccaagtgctagctaga
gataatggatgtgattcctcaaattctctcttccagacaggctctggtaaaacggtcaat
atatcttcagatggtttggttagagccaagacattgttgggattggaagaagatactgat
aattgcgtttctcaaggctatcagcattcagcaaaaccaaatacgccatttggatggcaa
ggtttatctcctctagaaatgggagagggcgtgaacaatagtgtgattaaggatgtcagg
tcagttccaagacattcttttgattctaagattggttcagcaggaagtagattgaagaat
cagggaaatccaaacattatgctacccgaaatgcatagttcagctctcaaaccacctcca
atcaagttccatactgctggtggaagatctctatctgtctctggtgatgcactgaaacgt
gcaatgagccttcttggtgaaccagaactgggaactttcttgaatgaaggggatgcagat
gattcaattttttctctctcaaaggagacaagattgactgatacttcatcaaatgaagga
aatgatcctcggactcccttttctcacgagaaaatggaaaattgcaaaaatatgccaaat
atcttcatatccccattacggtcgtcttcttatcaagggcggttgcccgtcaagtcagaa
gatattattggagggaataacttgatcaaggaatttgatgctgttcaccatggcaatgct
tgtagattaaacagtaatgcatcttctcttgagaagcggttaagcgatggccaaggtggt
tccgacacagtagcaaaaagttctttggcaaatggtgtcggttcaaggattaattcattt
ggacggtcaccagccaggccattggttgatatttcaaataccattggcacggcttgtaca
aataatggacaaatgactagtgtaaagagaatactcgggaaaagttctatttctccattc
aaaaagccccgcagctccaaattttccacccctttgaatagtactgttccatttgtttct
aatggtttatctacttcaacatctgcaccttcatgctgcaaaactggaatttcctcacgc
tacccatttaagattccaagaatgtatattaaggaatttattaaagtacctccgtcaaac
cagaatatgttggaggttttgtctgaccagatcagatgcatcaaatcaactaatgcagaa
aagtatacttttcatgatgaaactggattaaattgcattggaccagaagcttttttccac
atgttggctcggacaggagcattagagcaatatgcttcaaaagagtgggtcataaatcac
tacaagtggattgtttggaaactggcatgttatgagagatacaatcccactaaagctgct
ggaaaatttgttacagcgtccaatgtgctcgaggaattgaagtatagatacgaaagagaa
gtcaatcacggccaccgctctgcaattaaaagaatactggaaggggatgcatcgccttct
ttgatgatggttctatgcatttcggcagtttgctcaatttgtgatctaaagaatgatact
tcttccgtggcagtaactggggctcaaaatagtaatgcaacaaaagttgaactaactgat
gggtggtatgcaatggatgctgttttggacgcacagctatcaaagcagttagctgccgga
aaactgtttgtgggacagaaacttcggatctggggagcaggattatgcggctgggttgga
cctgtttcacccctcgaggtgtcaaggacagttagtttgctattgcacataaatgggacg
tacagaactcattgggctgatcgactgggattctgtaaaggcgttggtgctcctttagca
tttaggtgcattaagagtaatgggggtccggtgcctctgactttagttggagtcagacgg
atataccctctcctctacaaggagaggttaagtaatggaggatctattgttagatcagag
aggatggagagtagaatggtgcaattgtacaatcagaggcgatctactgttgtagagggc
attgtttctgagtttcaaagaggcacaaaagattcaaataattataatgacactgatagt
gaagaaggagcaaaaattttgaggatacttgagacggctgcagaacctgaagtattaatg
gcagagatgagtccggagcagctaacctcttttgctacttatcaagcaaaactagaggca
accaagcagtcggacatggagaaagcaatcaagaaagctttcgaaggtgctggcttaggt
gagagagaagtcaccccttttatgagagtgagagtggttggattaacaaataaaatctat
cacagaaaggacagcccgaaagaaggcttgataacaatctggaacccaacagacaagcag
caacatgagctggctgagggtcaggcttattccgttgcaggacttgtacctattaattct
gatgcaaataccctatacttgcaagcaaggggatccactaccaaatggcagcctttatct
tcccaagtaaccgaacactttattcgatttcacagtcctcgcaaatcagtcttactgtcg
ggtttgggtgaggttccactttccagtgagtttgatattgctgcggtcgtagtgtacgtg
ggggaggtttttgcagaccctcaccaaaggaaacagtgggtgtttgtgacggatggctcc
atttccgagtcacgggcagaggaattatccaattctttacttgccatcagcttctgctca
tcagacgttgatgattcatcatttgcaccagtcaactctaatcttgcaggatccacgatt
ggtttctgtaatctcatcaagagagcgaaggaccaaatgaatcatctctgggtagcagaa
gctacagaaaattcaatctactttctaaatcttgattctcccccttgttctcacctaaaa
aatgcagctgccttaacgcaaaaatgggcaagaatgtcgagtttgactttggataagctt
agagagaaggttttatttattattggtgattgtaagggctaa
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