KEGG   Juglans regia (English walnut): 108982325
Entry
108982325         CDS       T05245                                 
Name
(RefSeq) cyclin-T1-5-like isoform X1
  KO
K15188  cyclin T
Organism
jre  Juglans regia (English walnut)
Pathway
jre03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:jre00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    108982325
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:jre03021]
    108982325
Transcription machinery [BR:jre03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Super elongation complex (SEC)
     108982325
    Brd4/P-TEFb complex
     108982325
    7SK RNP complex
     108982325
SSDB
Motif
Pfam: Cyclin_N CycT2-like_C Cyclin_C RE_TaqI TFIIB Cyclin_C_2
Other DBs
NCBI-GeneID: 108982325
NCBI-ProteinID: XP_035544404
UniProt: A0A6P9EAF8
LinkDB
Position
3:17688712..17706844
AA seq 624 aa
MFHLIGPFLAVVDVFLSIISYFLGIHMAGILPGESSHHGTSDGGSSRNSLDRQEEVGRWY
LSRKEIEENSPSRRDGTDLKKETYLRKSYCTFLQDLGMRLKVPQVTIATAIIFCHRFFLR
QSHAKNDRRTIATVCMFLAGKVEETPRPLKDVILVSYEIIHKKDPAAAQRIKQKEVYEQQ
KELILLGERVVLATLGFDLNVHHPYKPLVEAIKKFKVAQNALAQVAWNFVNDGLRTSLCL
QFKPHHIAAGAIFLAAKFLKVKLPSDGEKVWWQEFDVTPRQLEEVSNQMLELYEQNRVPP
SQGSEVEGSVGSGPSHRGPTKVPSMNEEQVSKQIASRLVSDLSSGDNYGLPARGLQNQGN
ENGSAEMGSVITEHKVDVEIKDAQHPEYVPQKDNIREVPNRSKVGTERPGGEDQERNNGR
NETAEPGEWRDDDASRKSGSMVGRNLELREGPLGQSPKEAMKIDKDKLKAALEKRRKSRG
EITRKKDVMDEDDIIERELEDGVELAAEDEKNKRDRRQSWSKSENLDHGKEHEEVGVGNH
SAIKGQSSRGSQVENAEEGEMLDDASPMLNSRKRKAGSPLDRQLEGKKRQDYIPSYHHDS
IEDGHRMSRYADREHRRHSQENNL
NT seq 1875 nt   +upstreamnt  +downstreamnt
atgtttcacttgataggaccttttcttgctgtagtagacgtatttttgtccattatttcg
tactttttggggatacacatggctggaattttacctggggagtcatctcatcatggcacg
tctgatggtgggtcttcaagaaattctctagacaggcaagaggaagttggtcgctggtat
ttgtcaagaaaggaaattgaagaaaattccccttcaagaagagatgggactgacctgaag
aaagaaacatatttacgcaagtcgtactgcacatttttgcaggatttgggcatgaggcta
aaagtgccccaggtaaccattgctacagcaataatattttgtcatcggtttttccttcgt
caatcacacgccaagaatgacagaaggacaattgcaactgtgtgtatgttcctggctggg
aaggttgaagaaactcctcgtccacttaaagatgttattctcgtctcttatgagataatt
cacaaaaaagatccggctgcagcccagaggatcaaacagaaggaagtatatgagcaacaa
aaagagctaattttacttggagagagggtggtacttgccactttgggttttgacctcaat
gttcaccacccttataagccccttgttgaagctataaagaagttcaaggttgctcagaat
gcccttgctcaagttgcatggaattttgttaatgatggtctgagaacatcgctctgcctg
caatttaagcctcatcacattgcggcaggtgccattttccttgctgccaagttcctcaaa
gtgaagcttccatcggatggtgagaaggtctggtggcaagaatttgatgtcaccccacgt
caattggaggaagttagtaatcaaatgctggaactctatgagcaaaaccgagtgccccca
tcccaaggtagtgaagttgaaggaagtgttggcagtgggccaagtcatcggggcccgacg
aaagttccatccatgaacgaggaacaagtttcaaagcagattgcatctcgtctagtgtca
gatctttcatctggtgacaattatggcttgccggcaagaggtttgcaaaatcaaggtaat
gaaaatggcagtgcggagatgggtagtgttattactgagcacaaggtggatgtagaaatt
aaagatgctcagcatcctgagtatgttccccaaaaggataacatcagagaagttccaaat
agatccaaggtggggacagagcgacctgggggtgaagaccaagaaaggaataatgggagg
aatgagactgcagaaccaggagagtggagggatgatgatgcttcacgaaagtccggcagt
atggttggtcgaaatttggagctccgggaaggtccccttggccaatcacccaaagaagct
atgaagattgacaaggacaagcttaaggctgcacttgagaaaagaaggaagtctcgtggg
gaaattacacggaagaaagacgtgatggatgaggatgatatcattgagagggaactagaa
gacggggttgaattggcagcagaagatgagaaaaacaagcgggatagaaggcaaagctgg
tcaaaatctgagaatttagatcatgggaaggagcatgaggaagttggagtgggaaaccac
tcggcaataaagggccagtcatcaaggggatcgcaagtagagaatgcagaagagggagag
atgttagatgatgcttctcctatgttgaacagccgtaagagaaaagctgggagcccactg
gacaggcagttggaggggaagaagcggcaggattacataccgagttatcaccatgactcc
atagaagatggacacaggatgagtcgttatgcagatcgggagcacagaaggcattcacag
gagaataatttgtga

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